Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012123g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 2.2e-47 193.0 99 100.0
Nitab4.5_0001816g0110 Nicotiana tabacum HOM05D000132 ORTHO05D000058 8.0e-29 131.3 134 59.0
Nitab4.5_0005157g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 4.0e-28 129.0 116 66.4
Nitab4.5_0000232g0270 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.1e-25 120.9 132 56.1
Nitab4.5_0000232g0350 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.3e-23 114.0 133 54.1
PGSC0003DMG401025507 Solanum tuberosum HOM05D000053 ORTHO05D000058 1.3e-23 114.0 94 64.9
PGSC0003DMG400017713 Solanum tuberosum HOM05D000132 ORTHO05D000058 2.1e-21 106.7 134 50.7
Sopen04g029240 Solanum pennellii HOM05D000132 ORTHO05D000058 8.0e-21 104.8 134 51.5
CAN.G575.69 Capsicum annuum HOM05D000053 ORTHO05D000058 1.0e-20 104.4 99 62.6
Peaxi162Scf00041g01422 Petunia axillaris HOM05D000132 ORTHO05D000058 1.4e-20 104.0 124 50.8
CAN.G101.32 Capsicum annuum HOM05D000132 ORTHO05D000058 4.0e-20 102.4 121 52.1
CAN.G193.27 Capsicum annuum HOM05D000132 ORTHO05D000058 4.0e-20 102.4 121 52.1
CAN.G2870.1 Capsicum annuum HOM05D000132 ORTHO05D000058 4.0e-20 102.4 121 52.1
CAN.G1579.19 Capsicum annuum HOM05D000132 ORTHO05D000058 5.2e-20 102.1 91 62.6
Solyc04g074030.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 2.6e-19 99.8 133 48.9
CAN.G575.125 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-19 99.0 88 60.2
Solyc04g074000.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 9.8e-19 97.8 133 48.1
CAN.G1836.1 Capsicum annuum HOM05D000132 ORTHO05D000058 3.7e-18 95.9 120 52.5
Nitab4.5_0001307g0030 Nicotiana tabacum HOM05D000132 ORTHO05D000058 6.3e-18 95.1 131 49.6
PGSC0003DMG400014719 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.3e-18 95.1 117 50.4
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 8.3e-18 94.7 122 50.8
Peaxi162Scf00168g01723 Petunia axillaris HOM05D000132 ORTHO05D000058 1.4e-17 94.0 136 44.9
Solyc04g074020.2 Solanum lycopersicum HOM05D000132 ORTHO05D000058 2.4e-17 93.2 133 46.6
CAN.G575.67 Capsicum annuum HOM05D000053 ORTHO05D000058 3.1e-17 92.8 120 48.3
Solyc06g008270.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.1e-17 91.3 117 50.4
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.7e-16 89.7 121 47.1
CAN.G575.84 Capsicum annuum HOM05D000132 ORTHO05D000058 3.5e-16 89.4 120 51.7
CAN.G1833.5 Capsicum annuum HOM05D000132 ORTHO05D000058 5.9e-16 88.6 97 56.7
CAN.G21.6 Capsicum annuum HOM05D000132 ORTHO05D000058 1.0e-15 87.8 107 53.3
Peaxi162Scf00041g01424 Petunia axillaris HOM05D000132 ORTHO05D000058 1.0e-15 87.8 131 45.0
Sopen06g003130 Solanum pennellii HOM05D000053 ORTHO05D000035 1.0e-15 87.8 117 49.6
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.0e-15 87.8 121 47.1
CAN.G101.34 Capsicum annuum HOM05D000132 ORTHO05D000058 1.7e-15 87.0 139 44.6
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 1.7e-15 87.0 119 47.9
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 2.2e-15 86.7 121 47.9
CAN.G575.72 Capsicum annuum HOM05D000053 ORTHO05D000058 2.9e-15 86.3 120 47.5
CAN.G575.115 Capsicum annuum HOM05D000053 ORTHO05D000035 3.8e-15 85.9 121 48.8
PGSC0003DMG400011989 Solanum tuberosum HOM05D000132 ORTHO05D000058 6.5e-15 85.1 116 53.4
Nitab4.5_0006164g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000058 8.5e-15 84.7 119 47.9
CAN.G793.60 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-14 84.3 120 47.5
Nitab4.5_0002757g0110 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.1e-14 84.3 120 48.3
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.1e-14 84.3 121 47.1
CAN.G792.60 Capsicum annuum HOM05D000053 ORTHO05D000058 1.5e-14 84.0 78 61.5
Nitab4.5_0002757g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.5e-14 84.0 118 47.5
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 1.5e-14 84.0 121 45.5
PGSC0003DMG400024447 Solanum tuberosum HOM05D000132 ORTHO05D000058 2.5e-14 83.2 117 47.9
CAN.G2075.2 Capsicum annuum HOM05D000053 ORTHO05D000035 3.2e-14 82.8 115 47.8
CAN.G575.71 Capsicum annuum HOM05D000132 ORTHO05D000058 9.4e-14 81.3 120 45.0
PGSC0003DMG400027966 Solanum tuberosum HOM05D000053 ORTHO05D000058 2.7e-13 79.7 96 53.1
PGSC0003DMG400027971 Solanum tuberosum HOM05D000132 ORTHO05D000058 2.7e-13 79.7 126 44.4
CAN.G101.9 Capsicum annuum HOM05D005506 ORTHO05D004172 3.6e-13 79.3 52 76.9
CAN.G575.124 Capsicum annuum HOM05D000053 ORTHO05D000058 3.6e-13 79.3 111 45.9
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 3.6e-13 79.3 116 48.3
CAN.G767.21 Capsicum annuum HOM05D000053 ORTHO05D000058 4.7e-13 79.0 111 47.7
PGSC0003DMG400027967 Solanum tuberosum HOM05D000132 ORTHO05D000058 4.7e-13 79.0 126 44.4
CAN.G2075.7 Capsicum annuum HOM05D000132 ORTHO05D000058 8.0e-13 78.2 102 53.9
CAN.G575.121 Capsicum annuum HOM05D000002 ORTHO05D000001 8.0e-13 78.2 107 46.7
CAN.G866.28 Capsicum annuum HOM05D000132 ORTHO05D000058 8.0e-13 78.2 111 46.8
PGSC0003DMG401006401 Solanum tuberosum HOM05D000132 ORTHO05D000058 8.0e-13 78.2 133 43.6
CAN.G1833.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.8e-12 77.0 110 50.0
CAN.G1768.1 Capsicum annuum HOM05D000053 ORTHO05D000058 4.0e-12 75.9 109 46.8
CAN.G575.86 Capsicum annuum HOM05D000132 ORTHO05D000058 4.0e-12 75.9 104 48.1
CAN.G193.25 Capsicum annuum HOM05D017865 ORTHO05D000058 5.2e-12 75.5 72 62.5
Cc00_g11970 Coffea canephora HOM05D000132 ORTHO05D000058 1.2e-11 74.3 79 50.6
CAN.G517.2 Capsicum annuum HOM05D000132 ORTHO05D000058 2.6e-11 73.2 119 46.2
Solyc04g074050.4 Solanum lycopersicum HOM05D000132 ORTHO05D000058 2.6e-11 73.2 117 47.9
CAN.G518.12 Capsicum annuum HOM05D000053 ORTHO05D000058 9.8e-11 71.2 50 76.0
CAN.G1484.12 Capsicum annuum HOM05D002496 ORTHO05D002787 2.8e-10 69.7 118 44.9
CAN.G1579.25 Capsicum annuum HOM05D000053 ORTHO05D000035 6.3e-10 68.6 99 49.5
Sopen12g034600 Solanum pennellii HOM05D000053 ORTHO05D000035 1.1e-09 67.8 109 42.2
PGSC0003DMG401023870 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.1e-09 67.8 100 44.0
Cc00_g20650 Coffea canephora HOM05D000132 ORTHO05D000058 1.8e-09 67.0 109 42.2
Nitab4.5_0000014g0450 Nicotiana tabacum HOM05D000132 ORTHO05D000058 2.4e-09 66.6 119 42.0
Solyc12g049200.1 Solanum lycopersicum HOM05D000053 ORTHO05D000058 2.4e-09 66.6 96 46.9
Solyc12g049190.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.1e-09 66.2 116 41.4
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 3.1e-09 66.2 119 41.2
PGSC0003DMG400014717 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.1e-09 66.2 100 44.0
PGSC0003DMG401023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.1e-09 66.2 99 43.4
Solyc12g099980.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.6e-08 63.9 98 42.9
Cc03_g10600 Coffea canephora HOM05D039641 ORTHO05D000058 4.5e-08 62.4 98 42.9
PGSC0003DMG400004722 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.9e-08 62.0 100 41.0
Cc00_g33160 Coffea canephora HOM05D000132 ORTHO05D000058 7.7e-08 61.6 110 41.8
Cc00_g05240 Coffea canephora HOM05D000132 ORTHO05D000058 1.0e-07 61.2 98 40.8
Cc03_g10650 Coffea canephora HOM05D000132 ORTHO05D000058 1.0e-07 61.2 110 40.9
CAN.G2075.3 Capsicum annuum HOM05D000053 ORTHO05D000035 2.3e-07 60.1 104 43.3
CAN.G1579.22 Capsicum annuum HOM05D000053 ORTHO05D000035 2.9e-07 59.7 98 44.9
PGSC0003DMG401021514 Solanum tuberosum HOM05D000132 ORTHO05D000058 3.8e-07 59.3 103 43.7
Cc04_g15220 Coffea canephora HOM05D000132 ORTHO05D000058 6.6e-07 58.5 85 43.5
Carub.0001s3342 Capsella rubella HOM05D000132 ORTHO05D000058 8.6e-07 58.2 95 37.9
Cc00_g14470 Coffea canephora HOM05D000132 ORTHO05D000058 8.6e-07 58.2 85 44.7
Cc00_g05290 Coffea canephora HOM05D000132 ORTHO05D000058 1.5e-06 57.4 109 40.4
Cc00_g21640 Coffea canephora HOM05D000132 ORTHO05D000058 1.9e-06 57.0 103 41.7
GSVIVG01008435001 Vitis vinifera HOM05D000132 ORTHO05D000058 1.9e-06 57.0 113 38.1
Actinidia33140 Actinidia chinensis HOM05D000132 ORTHO05D000058 2.5e-06 56.6 125 36.0
Cc00_g11210 Coffea canephora HOM05D000132 ORTHO05D000058 2.5e-06 56.6 111 37.8
Cc00_g11980 Coffea canephora HOM05D000132 ORTHO05D000058 2.5e-06 56.6 85 44.7
PGSC0003DMG400037551 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-06 56.2 123 35.8
CSS0033719 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 5.6e-06 55.5 95 43.2
CAN.G2844.1 Capsicum annuum HOM05D000132 ORTHO05D000058 5.6e-06 55.5 98 38.8
Cc00_g05230 Coffea canephora HOM05D000132 ORTHO05D000058 5.6e-06 55.5 109 39.4
Cc00_g05990 Coffea canephora HOM05D000132 ORTHO05D000058 7.3e-06 55.1 108 39.8
Oeu062212.1 Olea europaea HOM05D000132 ORTHO05D000058 7.3e-06 55.1 132 33.3
GSVIVG01008436001 Vitis vinifera HOM05D000132 ORTHO05D000058 7.3e-06 55.1 92 41.3
Cc00_g20640 Coffea canephora HOM05D000132 ORTHO05D000058 9.5e-06 54.7 108 40.7
Dinv23935 Davidia involucrata HOM05D000132 ORTHO05D000058 9.5e-06 54.7 114 36.0


User provided reference genes

Program Settings