Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.3e-157 557.0 280 100.0
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.0e-123 444.5 280 82.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 8.7e-106 387.5 209 90.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.3e-105 385.6 209 90.0
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 5.7e-105 384.8 213 87.8
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 4.8e-104 381.7 210 89.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 8.2e-104 380.9 209 89.5
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 6.1e-91 338.2 221 77.4
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.0e-90 337.4 220 75.9
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.7e-90 334.7 225 73.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 5.7e-89 331.6 225 72.9
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 4.8e-88 328.6 212 76.9
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.5e-86 322.0 207 77.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.3e-85 320.5 221 72.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.9e-85 319.3 225 69.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.9e-85 319.3 213 70.9
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 5.0e-85 318.5 223 71.3
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.5e-85 318.2 213 72.8
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 8.5e-85 317.8 207 76.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 2.5e-84 316.2 209 75.1
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 3.2e-84 315.8 212 72.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.6e-83 313.5 209 74.2
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.1e-83 313.2 212 70.8
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 6.1e-83 311.6 213 72.8
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-82 310.8 212 70.8
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-82 310.8 212 70.8
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-82 310.5 212 69.8
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.3e-82 309.7 215 71.2
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.3e-82 309.7 207 73.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.3e-82 309.7 207 73.9
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.0e-82 309.3 213 72.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.0e-82 309.3 212 69.8
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 6.7e-82 308.1 227 67.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 8.8e-82 307.8 206 72.8
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 8.8e-82 307.8 224 66.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 8.8e-82 307.8 224 67.0
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.5e-81 307.0 212 68.4
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.5e-81 307.0 210 72.9
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.0e-81 306.6 212 69.3
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 2.0e-81 306.6 212 70.8
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.6e-81 306.2 212 68.9
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.6e-81 306.2 210 70.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 3.3e-81 305.8 212 71.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 9.7e-81 304.3 213 70.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.3e-80 303.9 212 69.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.7e-80 303.5 213 69.0
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.2e-80 303.1 207 72.5
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.2e-80 303.1 216 69.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.7e-80 302.4 213 70.0
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 6.3e-80 301.6 213 66.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 6.3e-80 301.6 213 68.1
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-79 300.4 219 67.1
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.8e-79 300.1 212 67.5
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 4.1e-79 298.9 212 67.0
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 4.1e-79 298.9 212 68.9
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 5.3e-79 298.5 212 67.0
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 5.3e-79 298.5 213 69.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.0e-79 298.1 206 74.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.0e-79 298.1 206 74.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.2e-78 297.4 208 68.8
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.2e-78 297.4 213 69.0
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.5e-78 297.0 212 67.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.5e-78 297.0 212 67.5
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.5e-78 297.0 212 67.5
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.5e-78 297.0 212 67.5
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.5e-78 297.0 222 66.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.0e-78 296.6 212 66.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 3.5e-78 295.8 212 68.9
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.5e-78 295.4 212 67.0
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 5.9e-78 295.0 203 70.4
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 7.7e-78 294.7 231 63.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 7.7e-78 294.7 212 67.9
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 3.8e-77 292.4 214 67.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.0e-77 292.0 212 68.4
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.2e-76 289.3 213 65.3
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.1e-73 280.8 194 70.1
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.1e-73 280.8 207 70.0
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.8e-72 275.4 209 63.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.1e-71 274.2 226 59.7
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.4e-71 273.9 206 68.0
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.2e-70 270.8 212 65.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.2e-70 270.8 199 65.8
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 3.5e-70 269.2 212 62.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.5e-70 268.9 177 74.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.7e-70 268.1 212 65.1
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.1e-68 264.2 212 65.1
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 3.2e-68 262.7 182 69.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.6e-67 259.2 193 64.8
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.7e-64 250.4 212 59.0
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 8.3e-64 248.1 169 71.6
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 9.1e-63 244.6 193 62.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-62 244.2 212 61.8
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-61 240.4 212 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 8.5e-61 238.0 211 54.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 4.0e-58 229.2 161 70.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.3e-56 221.9 186 54.3
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.4e-55 219.9 181 55.8
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.3e-53 213.4 209 52.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.5e-52 210.7 213 54.0
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.2e-47 193.0 227 47.1
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.4e-47 192.2 206 47.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.3e-45 187.6 169 56.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.3e-44 182.6 202 49.0
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 8.9e-42 174.9 191 47.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.5e-36 156.8 213 43.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-30 137.9 103 68.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-28 130.2 100 62.0
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.3e-21 107.8 75 68.0
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.7e-21 107.5 83 65.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 5.6e-20 102.4 179 35.8
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.3e-13 81.3 54 63.0
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 8.7e-13 78.6 52 65.4
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 1.3e-08 64.7 43 72.1


User provided reference genes

Program Settings