Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.9e-85 318.5 164 100.0
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.8e-82 309.3 164 98.2
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 2.5e-76 288.9 164 92.1
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.2e-75 286.6 165 90.3
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.2e-75 286.6 165 90.3
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 4.1e-71 271.6 164 87.8
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.6e-70 269.6 164 86.6
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 7.2e-68 260.8 164 81.1
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.6e-67 259.6 164 82.3
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 3.0e-66 255.4 164 78.7
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 9.7e-65 250.4 164 78.0
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 9.7e-65 250.4 165 80.0
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 8.2e-64 247.3 164 78.0
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.1e-63 245.0 164 76.8
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 5.3e-63 244.6 164 76.2
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 5.3e-63 244.6 164 79.3
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.2e-62 243.4 164 76.2
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.6e-62 243.0 164 78.7
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 1.6e-62 243.0 164 78.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 1.6e-62 243.0 164 78.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 3.5e-62 241.9 165 75.2
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 4.5e-62 241.5 163 75.5
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 4.5e-62 241.5 164 75.6
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.0e-61 240.4 164 74.4
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.3e-61 240.0 164 75.6
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.2e-61 239.2 164 75.6
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 2.2e-61 239.2 164 76.2
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 6.5e-61 237.7 164 75.0
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.1e-60 236.9 164 75.0
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.5e-60 236.5 164 77.4
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.9e-60 236.1 164 70.7
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.9e-60 236.1 163 73.6
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.9e-60 236.1 166 75.3
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.5e-60 235.7 164 74.4
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 3.2e-60 235.3 164 74.4
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 3.2e-60 235.3 164 72.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 7.2e-60 234.2 163 74.2
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 9.4e-60 233.8 162 75.3
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 9.4e-60 233.8 164 73.2
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.6e-59 233.0 165 74.5
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.7e-59 232.3 164 72.6
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 4.7e-59 231.5 163 74.8
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.4e-58 229.9 167 70.7
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.8e-58 227.6 164 71.3
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 6.8e-58 227.6 169 74.6
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 8.8e-58 227.3 164 71.3
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.2e-57 226.9 161 71.4
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 2.0e-57 226.1 166 71.7
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.0e-57 226.1 164 70.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.6e-57 225.7 141 78.0
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.6e-57 225.7 166 71.1
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.6e-57 225.7 164 71.3
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 2.6e-57 225.7 164 72.0
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 5.7e-57 224.6 165 71.5
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 7.5e-57 224.2 165 73.9
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 7.5e-57 224.2 167 71.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.7e-56 223.0 159 72.3
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.7e-56 223.0 159 72.3
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.7e-56 223.0 165 72.7
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.7e-56 223.0 164 70.7
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 6.3e-56 221.1 162 72.8
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.1e-55 220.3 159 71.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 2.4e-55 219.2 160 73.1
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 2.4e-55 219.2 160 73.1
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 2.4e-55 219.2 160 73.1
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 161 73.9
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 3.1e-55 218.8 165 70.9
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 5.4e-55 218.0 164 70.1
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 7.0e-55 217.6 164 68.9
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 9.1e-55 217.2 166 72.3
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.6e-54 216.5 160 72.5
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.6e-54 216.5 166 68.7
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.6e-54 216.5 161 67.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.7e-54 215.7 164 68.3
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 2.7e-54 215.7 162 67.3
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 7.7e-54 214.2 160 70.0
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.0e-53 213.8 164 69.5
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.3e-53 213.4 165 69.1
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.3e-53 212.6 161 66.5
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 2.9e-53 212.2 166 65.1
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 3.8e-53 211.8 159 69.2
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.8e-53 211.8 165 68.5
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.8e-53 211.8 165 68.5
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.8e-53 211.8 149 72.5
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 5.0e-53 211.5 122 78.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.5e-52 209.9 161 66.5
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.5e-52 209.9 161 65.2
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.5e-52 209.9 164 65.9
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.9e-52 209.5 148 71.6
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 4.2e-52 208.4 161 65.2
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 7.2e-52 207.6 163 69.9
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 1.2e-51 206.8 164 67.1
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.1e-51 206.1 169 68.6
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 4.7e-51 204.9 164 65.9
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 4.7e-51 204.9 148 73.6
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 6.1e-51 204.5 163 68.7
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.8e-50 203.0 162 66.7
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 2.3e-50 202.6 162 63.0
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 2.3e-50 202.6 162 64.8
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.0e-50 202.2 162 64.8
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 4.0e-50 201.8 167 62.9
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 4.0e-50 201.8 161 63.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.0e-50 201.8 162 67.3
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.2e-50 201.4 162 67.3
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 1.4e-47 193.4 119 75.6
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 2.4e-47 192.6 143 62.9
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 2.0e-46 189.5 139 71.9
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 9.5e-44 180.6 150 64.0
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 4.0e-42 175.3 151 62.3
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.6e-38 161.8 97 77.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.6e-35 153.3 122 56.6
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 2.3e-34 149.4 130 55.4
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.1e-30 136.3 77 77.9
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.9e-29 132.1 84 76.2
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.6e-27 126.7 108 66.7
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 8.9e-26 120.9 139 47.5
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 4.4e-25 118.6 90 67.8
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 2.2e-24 116.3 90 66.7
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 2.1e-22 109.8 171 50.9
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 5.2e-18 95.1 72 66.7
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 7.8e-14 81.3 48 77.1
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 1.7e-13 80.1 48 79.2
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.7e-13 80.1 118 38.1
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 3.6e-11 72.4 153 32.0
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.8e-10 70.1 131 33.6


User provided reference genes

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