Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.3e-264 914.1 449 100.0
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 4.6e-226 787.7 490 81.2
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 1.8e-225 785.8 485 81.0
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 1.7e-223 779.2 496 79.4
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 4.1e-222 774.6 479 81.6
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 3.6e-210 734.9 426 86.9
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 1.4e-201 706.4 485 70.1
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 9.1e-198 693.7 483 69.8
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.6e-197 693.0 482 70.5
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 2.0e-197 692.6 483 69.6
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 2.7e-197 692.2 483 68.1
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 3.5e-197 691.8 489 69.3
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 2.2e-196 689.1 483 69.6
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 5.0e-196 688.0 482 69.7
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 7.2e-195 684.1 442 74.0
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 9.4e-195 683.7 485 68.2
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 4.0e-193 678.3 479 70.4
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 5.7e-192 674.5 485 67.2
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 8.3e-191 670.6 487 67.8
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 8.3e-191 670.6 485 68.9
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 1.1e-190 670.2 480 68.8
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 4.1e-190 668.3 483 66.7
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 7.0e-190 667.5 478 67.8
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 1.2e-189 666.8 486 67.5
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.7e-189 665.6 478 66.9
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 7.7e-189 664.1 485 67.2
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 6.6e-188 661.0 482 67.4
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 8.6e-188 660.6 497 66.6
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 1.9e-187 659.4 482 67.6
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 5.5e-187 657.9 483 65.8
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 3.6e-186 655.2 487 66.3
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 1.8e-185 652.9 480 66.2
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 2.3e-185 652.5 485 66.4
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 2.3e-185 652.5 483 66.0
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 8.9e-185 650.6 443 70.0
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 1.5e-184 649.8 483 66.0
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 2.0e-184 649.4 468 67.5
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 2.6e-184 649.0 481 64.9
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 4.4e-184 648.3 483 66.9
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 9.8e-184 647.1 482 65.1
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 9.8e-184 647.1 487 65.3
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 1.3e-183 646.7 484 66.1
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 8.3e-183 644.0 484 66.3
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 5.4e-182 641.3 485 66.2
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 7.0e-182 641.0 482 64.1
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 2.0e-181 639.4 486 64.8
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 3.5e-181 638.6 477 64.6
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 3.5e-181 638.6 484 65.7
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.0e-180 637.1 479 65.6
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.0e-180 637.1 485 66.2
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.7e-180 636.3 497 62.6
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 2.9e-180 635.6 485 66.2
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 2.9e-180 635.6 485 66.2
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 8.6e-180 634.0 482 64.7
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 7.3e-179 630.9 445 67.9
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 9.5e-179 630.6 485 63.7
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 9.5e-179 630.6 519 60.9
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.8e-178 629.0 501 62.7
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 2.0e-176 622.9 498 62.4
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 2.0e-176 622.9 479 63.3
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.6e-176 622.5 542 58.5
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 2.6e-176 622.5 482 63.7
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 3.4e-176 622.1 471 66.7
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 6.4e-175 617.8 462 66.7
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.4e-174 616.7 478 64.0
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 4.1e-174 615.1 496 62.1
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.3e-172 610.1 476 62.2
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.7e-172 609.8 476 62.0
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 3.9e-172 608.6 479 61.8
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 3.3e-171 605.5 476 62.2
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 3.3e-171 605.5 513 59.6
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.3e-171 605.5 479 61.6
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 6.2e-170 601.3 662 49.5
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.8e-169 599.7 481 63.4
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 2.3e-169 599.4 465 66.0
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 3.1e-169 599.0 479 60.3
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 4.0e-169 598.6 479 60.3
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 8.3e-167 590.9 477 60.6
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 2.4e-166 589.3 485 61.2
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 2.7e-165 585.9 477 60.2
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 1.3e-159 567.0 485 61.0
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.4e-158 563.5 478 58.8
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 3.5e-157 558.9 478 58.2
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 4.6e-157 558.5 485 54.8
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 8.6e-156 554.3 432 64.4
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.3e-151 540.4 437 61.8
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 1.1e-150 537.3 476 57.8
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.1e-149 533.1 345 75.7
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.7e-149 532.7 381 66.9
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 5.4e-142 508.4 479 55.5
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 2.3e-140 503.1 357 70.0
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 3.9e-140 502.3 357 68.6
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 4.3e-131 472.2 353 66.0
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 2.5e-126 456.4 335 66.0
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 7.1e-126 454.9 477 48.4
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 1.3e-122 444.1 336 64.0
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 2.4e-121 439.9 484 47.5
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 6.5e-119 431.8 255 80.8
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 1.4e-118 430.6 286 71.0
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 8.7e-116 421.4 274 71.9
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 3.7e-114 416.0 318 63.2
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 3.4e-112 409.5 280 67.9
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.6e-109 400.6 469 45.8
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 1.3e-106 391.0 475 43.6
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.4e-97 360.9 431 47.1
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.4e-94 350.9 353 53.3
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.9e-94 350.5 257 68.5
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 9.7e-83 311.6 270 60.4
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 1.4e-73 281.2 279 52.0
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 1.2e-67 261.5 152 80.9
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 2.9e-63 246.9 442 34.4
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 2.3e-60 237.3 433 35.3
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 3.4e-59 233.4 166 66.3
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 3.4e-59 233.4 166 66.3
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.9e-58 229.6 307 45.9
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 1.9e-57 227.6 457 31.5
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 2.0e-51 207.6 140 73.6
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 2.9e-50 203.8 140 70.0
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 4.1e-49 199.9 443 31.6
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.3e-46 190.3 152 66.4
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 3.3e-46 190.3 91 100.0
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 9.5e-46 188.7 166 57.2
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 2.3e-44 184.1 197 47.7
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 7.8e-32 142.5 130 50.0
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 6.2e-29 132.9 85 72.9
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.4e-28 131.0 97 62.9
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 2.9e-26 124.0 101 59.4
Medtr5g091610 Medicago truncatula HOM05D001363 ORTHO05D006839 3.3e-22 110.5 72 70.8
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.5e-19 101.7 59 83.1
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 1.3e-18 98.6 66 65.2
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 4.2e-17 93.6 74 60.8
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 3.9e-15 87.0 55 69.1
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.3e-14 84.0 60 63.3
SGA_v2.0_scaffold649G53360 Striga asiatica HOM05D005198 ORTHO05D006839 2.8e-13 80.9 48 75.0
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 6.2e-13 79.7 51 72.5
Lsat_1_v5_gn_5_150841 Lactuca sativa HOM05D005198 ORTHO05D004031 8.1e-13 79.3 45 80.0
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 6.9e-12 76.3 200 31.0
Os02g0606100 Oryza sativa ssp. japonica HOM05D005198 ORTHO05D006839 3.2e-09 67.4 79 53.2
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-08 65.5 296 20.9
C02p30710 Brassica napus HOM05D005198 ORTHO05D042013 2.7e-08 64.3 52 50.0
BolC2t09126H Brassica oleracea HOM05D005198 ORTHO05D042013 6.0e-08 63.2 52 48.1


User provided reference genes

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