Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 1.3e-55 219.5 113 100.0
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.2e-47 192.2 99 99.0
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 1.1e-46 189.9 99 98.0
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 2.4e-46 188.7 99 98.0
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 2.4e-46 188.7 99 98.0
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 1.2e-45 186.4 99 97.0
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 2.7e-45 185.3 99 96.0
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 7.7e-45 183.7 99 94.9
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 3.8e-44 181.4 99 94.9
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 2.4e-38 162.2 99 80.8
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 4.1e-38 161.4 98 82.7
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 1.2e-37 159.8 99 78.8
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 5.0e-36 154.5 99 79.8
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 8.5e-36 153.7 97 79.4
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 1.9e-35 152.5 99 75.8
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 3.2e-35 151.8 98 77.6
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 3.2e-35 151.8 99 77.8
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 5.5e-35 151.0 98 76.5
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 1.6e-34 149.4 99 74.7
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 1.6e-34 149.4 98 76.5
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 2.1e-34 149.1 99 74.7
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 3.6e-34 148.3 99 73.7
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 3.6e-34 148.3 98 75.5
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 4.7e-34 147.9 95 77.9
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 4.7e-34 147.9 90 81.1
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 6.1e-34 147.5 99 73.7
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 6.1e-34 147.5 98 74.5
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 8.0e-34 147.1 97 75.3
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 1.0e-33 146.7 99 73.7
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 1.4e-33 146.4 98 73.5
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 1.8e-33 146.0 99 71.7
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.3e-33 145.6 98 73.5
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 3.0e-33 145.2 99 72.7
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 4.0e-33 144.8 91 79.1
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 5.2e-33 144.4 92 78.3
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 8.8e-33 143.7 90 80.0
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 8.8e-33 143.7 90 80.0
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 8.8e-33 143.7 99 71.7
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 1.2e-32 143.3 99 73.7
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 1.2e-32 143.3 99 73.7
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.5e-32 142.9 89 80.9
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 2.0e-32 142.5 98 71.4
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 2.0e-32 142.5 98 71.4
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 3.4e-32 141.7 100 71.0
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 5.7e-32 141.0 96 71.9
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 7.5e-32 140.6 100 71.0
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.5e-32 140.6 99 69.7
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.5e-32 140.6 99 69.7
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 9.8e-32 140.2 87 80.5
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 9.8e-32 140.2 87 80.5
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 9.8e-32 140.2 99 72.7
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 9.8e-32 140.2 92 76.1
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 9.8e-32 140.2 100 70.0
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 1.7e-31 139.4 95 71.6
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 2.2e-31 139.0 91 78.0
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 2.2e-31 139.0 99 69.7
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 2.2e-31 139.0 99 69.7
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 2.8e-31 138.7 86 81.4
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 2.8e-31 138.7 98 70.4
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 6.3e-31 137.5 97 69.1
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 8.3e-31 137.1 99 71.7
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 8.3e-31 137.1 98 69.4
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 8.3e-31 137.1 99 70.7
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 8.3e-31 137.1 99 68.7
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 1.1e-30 136.7 99 68.7
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 1.4e-30 136.3 98 70.4
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.4e-30 136.3 99 67.7
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.4e-30 136.3 99 67.7
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 1.8e-30 136.0 99 68.7
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 3.1e-30 135.2 100 70.0
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 3.1e-30 135.2 99 68.7
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 4.1e-30 134.8 99 70.7
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 4.1e-30 134.8 99 70.7
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 5.4e-30 134.4 90 72.2
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 7.0e-30 134.0 99 69.7
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 7.0e-30 134.0 99 69.7
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 9.2e-30 133.7 99 66.7
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 9.2e-30 133.7 99 69.7
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 1.2e-29 133.3 92 72.8
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 1.6e-29 132.9 92 71.7
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 1.6e-29 132.9 93 71.0
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 1.6e-29 132.9 97 70.1
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 2.0e-29 132.5 92 73.9
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 2.7e-29 132.1 95 66.3
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 3.5e-29 131.7 94 70.2
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 5.9e-29 131.0 99 69.7
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 7.8e-29 130.6 85 74.1
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 7.8e-29 130.6 89 71.9
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 1.0e-28 130.2 85 72.9
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 1.7e-28 129.4 99 64.6
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 2.3e-28 129.0 97 67.0
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 2.9e-28 128.6 100 66.0
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 2.9e-28 128.6 100 67.0
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 2.9e-28 128.6 91 70.3
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 3.8e-28 128.3 89 71.9
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 5.0e-28 127.9 102 65.7
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 5.0e-28 127.9 102 65.7
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 8.6e-28 127.1 97 67.0
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 8.6e-28 127.1 89 69.7
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 1.9e-27 125.9 95 68.4
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 1.9e-27 125.9 107 61.7
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 4.3e-27 124.8 99 62.6
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 9.5e-27 123.6 91 69.2
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 9.5e-27 123.6 90 68.9
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 2.8e-26 122.1 97 63.9
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 2.8e-26 122.1 97 63.9
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.8e-25 119.4 75 82.7
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 3.0e-25 118.6 94 66.0
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 2.6e-24 115.5 82 70.7
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 3.4e-24 115.2 76 71.1
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 7.5e-24 114.0 76 76.3
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 1.3e-23 113.2 76 71.1
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.7e-23 112.8 75 78.7
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 2.2e-23 112.5 87 59.8
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 2.2e-23 112.5 87 59.8
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.6e-21 106.3 76 71.1
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 4.3e-19 98.2 82 59.8
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 7.3e-19 97.4 75 66.7
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 2.3e-17 92.4 54 75.9
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 3.1e-17 92.0 87 52.9
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 9.8e-16 87.0 87 48.3
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 2.4e-14 82.4 77 58.4
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 3.2e-14 82.0 46 80.4
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 4.3e-11 71.6 96 46.9
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 1.2e-08 63.5 98 41.8


User provided reference genes

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