Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 0.0e+00 1229.9 621 100.0
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 0.0e+00 1134.8 617 93.8
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 2.7e-301 1038.1 649 80.7
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 6.1e-301 1036.9 652 80.8
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 6.3e-298 1026.9 652 80.4
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 5.2e-268 927.5 675 72.6
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 2.5e-209 732.6 656 59.6
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 2.6e-203 712.6 652 58.4
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 9.0e-196 687.6 658 56.1
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 4.2e-193 678.7 665 53.7
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 2.0e-190 669.8 664 54.5
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 4.1e-188 662.1 652 54.1
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 2.0e-187 659.8 637 53.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 2.6e-187 659.4 661 53.3
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 7.7e-187 657.9 659 53.7
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 4.7e-184 648.7 663 52.3
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 5.7e-182 641.7 659 53.0
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 9.7e-182 641.0 659 53.4
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 7.0e-180 634.8 658 52.1
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 9.1e-180 634.4 668 51.6
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 9.1e-180 634.4 661 53.4
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 2.2e-178 629.8 656 51.7
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 1.3e-173 614.0 661 51.6
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 4.1e-172 609.0 697 49.9
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 5.9e-171 605.1 663 49.8
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 5.2e-167 592.0 369 82.7
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 8.8e-167 591.3 589 52.5
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 2.8e-165 586.3 662 49.2
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 6.3e-165 585.1 643 49.5
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 4.1e-164 582.4 668 47.5
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 1.2e-163 580.9 639 49.3
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 1.6e-163 580.5 493 60.6
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.7e-163 579.7 665 47.4
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 5.9e-163 578.6 695 47.6
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 9.4e-161 571.2 665 49.3
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 1.2e-160 570.9 660 48.0
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 2.3e-159 566.6 661 48.0
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 1.5e-158 563.9 661 48.4
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.6e-158 563.1 641 47.3
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 5.7e-158 562.0 658 48.3
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 1.7e-157 560.5 660 48.0
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.2e-157 560.1 635 47.1
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 2.8e-157 559.7 660 48.0
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 8.3e-157 558.1 671 46.1
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 2.9e-154 549.7 750 44.3
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 6.6e-154 548.5 668 46.4
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.1e-153 547.7 659 45.8
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.5e-153 547.4 469 60.8
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 2.5e-153 546.6 674 46.0
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 2.5e-153 546.6 779 43.0
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 3.3e-153 546.2 668 47.9
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 4.2e-153 545.8 508 54.7
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 9.5e-153 544.7 674 45.8
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 3.0e-151 539.7 663 45.2
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 3.0e-151 539.7 664 45.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 4.0e-151 539.3 673 46.1
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 2.2e-149 533.5 673 45.9
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 4.9e-149 532.3 596 48.2
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 1.4e-148 530.8 646 47.5
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 4.1e-148 529.3 613 46.0
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 7.0e-148 528.5 602 48.8
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 2.7e-147 526.6 673 44.7
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 1.7e-146 523.9 578 49.7
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 3.9e-146 522.7 488 55.5
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 8.6e-146 521.5 593 48.6
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.5e-145 520.8 657 45.2
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 2.1e-144 516.9 672 45.7
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 8.0e-144 515.0 663 45.4
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 6.6e-138 495.4 661 44.6
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 1.5e-137 494.2 668 43.4
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 5.4e-132 475.7 680 42.5
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 5.4e-132 475.7 505 50.1
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 7.8e-131 471.9 666 43.7
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 1.2e-126 458.0 465 53.8
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 8.3e-125 451.8 426 54.0
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 9.2e-124 448.4 562 45.6
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 6.6e-122 442.2 701 38.8
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 3.6e-120 436.4 682 40.9
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 1.7e-117 427.6 711 40.4
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 2.4e-116 423.7 699 39.6
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 3.5e-115 419.9 722 38.1
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 1.6e-112 411.0 590 41.5
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.1e-111 408.3 488 45.7
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 5.8e-110 402.5 657 38.8
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 3.1e-103 380.2 685 37.5
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 2.0e-102 377.5 799 34.5
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 8.4e-93 345.5 653 38.3
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 2.5e-92 344.0 464 44.2
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.0e-91 339.3 499 39.5
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 1.0e-90 338.6 499 39.5
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.8e-87 327.8 706 33.9
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 5.0e-77 293.1 457 37.6
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 8.5e-77 292.4 264 59.5
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 1.0e-61 242.3 513 33.1
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.7e-61 241.5 260 50.4
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 8.0e-59 232.6 280 47.9
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.1e-55 222.2 370 38.9
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 1.8e-42 178.3 383 31.9
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 3.0e-42 177.6 383 32.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 2.0e-41 174.9 197 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 9.5e-36 156.0 245 35.5
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 1.6e-35 155.2 198 47.0
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 2.9e-32 144.4 164 44.5
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.6e-30 138.7 180 41.1
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 4.7e-27 127.1 128 55.5
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 8.0e-27 126.3 462 27.9
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 5.8e-25 120.2 203 39.4
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 7.0e-23 113.2 131 48.1
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.4e-18 99.0 499 22.8
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 1.9e-15 88.6 83 48.2
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 1.9e-15 88.6 151 41.1
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 5.4e-15 87.0 172 38.4
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.9e-12 78.6 160 34.4
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 9.5e-12 76.3 126 42.9
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.1e-10 72.8 90 40.0


User provided reference genes

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