Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.5e-217 759.2 382 100.0
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.2e-185 653.3 395 85.1
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.9e-172 609.4 376 83.2
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 3.4e-169 598.6 376 81.1
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 8.7e-165 583.9 376 78.7
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 1.1e-164 583.6 376 79.0
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 4.6e-142 508.4 377 70.3
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 3.9e-141 505.4 379 70.2
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 5.1e-141 505.0 377 70.0
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 5.0e-136 488.4 373 68.1
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.5e-135 486.1 372 68.3
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 3.0e-133 479.2 378 65.6
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 4.3e-132 475.3 378 66.4
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 2.8e-131 472.6 369 65.6
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 4.8e-131 471.9 376 65.4
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 6.3e-131 471.5 380 65.8
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 4.1e-130 468.8 372 65.6
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.0e-129 466.5 383 64.2
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 2.6e-129 466.1 378 65.3
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 4.5e-129 465.3 373 65.1
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 5.9e-129 464.9 372 62.9
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.3e-128 463.8 375 64.5
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 1.3e-128 463.8 379 64.1
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 2.2e-128 463.0 377 65.0
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 2.9e-128 462.6 370 66.5
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 5.0e-128 461.8 382 64.1
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 8.5e-128 461.1 382 63.9
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.4e-127 460.3 379 63.9
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 1.9e-127 459.9 376 65.4
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 1.9e-127 459.9 379 63.9
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 2.5e-127 459.5 378 63.8
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 2.5e-127 459.5 378 64.3
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 5.5e-127 458.4 372 62.9
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 5.5e-127 458.4 378 64.8
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 5.5e-127 458.4 399 61.4
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 1.2e-126 457.2 370 66.2
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 1.2e-126 457.2 370 64.9
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 2.7e-126 456.1 380 62.9
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 3.6e-126 455.7 380 63.4
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 4.6e-126 455.3 383 63.7
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 1.4e-125 453.8 372 62.1
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.9e-125 452.2 377 64.7
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.1e-124 450.7 377 64.7
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 7.4e-124 448.0 377 64.5
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 9.7e-124 447.6 374 63.6
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 3.7e-123 445.7 380 62.4
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 6.3e-123 444.9 362 61.6
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 8.2e-123 444.5 369 60.2
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 2.4e-122 443.0 343 67.3
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 2.6e-121 439.5 375 62.9
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 2.6e-121 439.5 375 63.5
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 3.4e-121 439.1 373 63.0
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.7e-120 436.8 343 67.1
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.9e-119 433.3 344 67.2
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.9e-119 433.3 438 55.5
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 7.2e-119 431.4 380 60.5
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 1.2e-118 430.6 368 56.5
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 2.1e-118 429.9 371 57.1
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 2.3e-117 426.4 376 61.2
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 3.9e-117 425.6 365 63.3
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 8.8e-117 424.5 373 61.1
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.5e-116 423.7 372 60.8
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 4.4e-116 422.2 351 61.5
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 7.4e-116 421.4 373 60.9
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 9.7e-116 421.0 367 60.8
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 2.8e-115 419.5 371 60.6
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 3.7e-115 419.1 375 60.0
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 3.7e-115 419.1 383 60.6
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 4.8e-115 418.7 374 61.0
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 4.8e-115 418.7 377 59.2
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 5.3e-114 415.2 371 60.1
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.2e-113 414.1 372 59.4
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.2e-113 414.1 372 59.4
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 1.5e-113 413.7 336 65.8
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.5e-113 413.7 371 59.8
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.0e-113 413.3 354 62.1
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 2.6e-113 412.9 337 58.8
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 7.7e-113 411.4 374 61.2
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 2.2e-112 409.8 342 63.2
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.1e-111 407.5 345 62.3
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 1.6e-110 403.7 347 62.2
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 3.6e-110 402.5 346 62.4
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.7e-110 402.1 347 62.0
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.4e-109 400.6 374 57.2
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 1.4e-109 400.6 381 57.2
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 3.9e-109 399.1 368 54.3
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 1.5e-108 397.1 368 57.6
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 4.4e-108 395.6 371 57.1
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 1.3e-107 394.0 368 58.2
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 2.2e-107 393.3 373 56.8
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 6.3e-107 391.7 371 57.1
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 5.3e-106 388.7 451 50.8
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 1.2e-105 387.5 379 59.1
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 5.0e-104 382.1 339 62.5
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.1e-103 380.9 335 63.3
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 2.5e-103 379.8 370 55.9
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.2e-102 377.5 293 61.4
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 2.1e-102 376.7 339 61.7
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.0e-101 374.4 371 53.9
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.8e-101 373.6 366 59.0
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 5.2e-101 372.1 338 59.2
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 6.8e-101 371.7 342 57.9
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 2.6e-100 369.8 301 63.1
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 1.3e-99 367.5 372 53.2
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 2.8e-99 366.3 371 54.7
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 2.8e-99 366.3 369 54.5
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 3.1e-98 362.8 337 58.5
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 4.1e-98 362.5 357 54.6
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 5.4e-98 362.1 337 58.8
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 9.1e-98 361.3 368 51.9
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.2e-97 360.9 371 51.8
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 5.9e-97 358.6 379 54.6
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 3.8e-96 355.9 369 53.4
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.1e-95 354.4 337 57.0
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 3.2e-95 352.8 360 53.9
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 4.2e-95 352.4 313 61.3
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 5.5e-95 352.1 357 54.1
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.2e-94 350.9 293 63.1
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.0e-94 348.2 351 53.6
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.4e-90 337.4 368 45.9
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 3.1e-90 336.3 280 56.8
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.2e-89 334.3 287 65.2
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.0e-89 333.6 242 63.6
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 5.9e-89 332.0 286 56.3
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.1e-87 327.8 427 46.4
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 5.6e-87 325.5 300 56.7
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.6e-87 325.5 295 61.0
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 2.8e-86 323.2 353 52.4
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 2.0e-84 317.0 371 49.3
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 9.8e-84 314.7 329 50.5
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 2.9e-83 313.2 285 55.8
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 3.7e-83 312.8 358 50.3
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 8.3e-83 311.6 371 49.6
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 1.1e-82 311.2 204 65.7
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.2e-81 307.8 376 51.3
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 9.5e-79 298.1 341 44.6
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 2.8e-78 296.6 338 46.4
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.2e-75 287.0 340 50.3
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.6e-73 280.8 225 62.7
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.0e-73 280.4 371 42.0
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 2.0e-73 280.4 202 61.4
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 3.5e-73 279.6 345 51.3
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 4.6e-73 279.3 344 49.7
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.7e-72 277.3 343 49.3
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 6.6e-72 275.4 349 47.9
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 8.6e-72 275.0 347 50.1
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 1.9e-71 273.9 340 47.9
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 3.3e-71 273.1 344 47.1
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 3.3e-71 273.1 345 50.4
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 9.5e-71 271.6 343 51.0
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.2e-70 271.2 344 49.1
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 2.8e-70 270.0 346 49.4
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 3.4e-68 263.1 351 48.1
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 4.9e-67 259.2 340 47.6
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.6e-65 254.2 345 47.2
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.2e-59 233.8 167 68.3
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 1.3e-56 224.6 244 42.2
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 5.4e-50 202.6 331 41.1
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 6.0e-49 199.1 331 38.4
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 6.0e-49 199.1 338 39.6
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 5.6e-47 192.6 383 34.2
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 2.1e-46 190.7 125 72.0
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 8.1e-46 188.7 125 70.4
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 6.9e-37 159.1 109 65.1
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 2.6e-12 77.4 118 33.9
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 2.9e-11 73.9 42 81.0
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 1.1e-10 72.0 73 60.3
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.1e-10 72.0 54 63.0
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-10 71.6 64 54.7
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 7.9e-09 65.9 66 51.5
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 3.0e-08 63.9 44 65.9
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 3.0e-08 63.9 45 71.1
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 1.1e-07 62.0 40 70.0
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 1.1e-07 62.0 40 70.0
FAN10G2408 Fragaria x ananassa HOM05D003920 ORTHO05D017698 2.8e-06 57.4 48 62.5
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 6.3e-06 56.2 30 83.3


User provided reference genes

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