Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011824g0010 Nicotiana tabacum HOM05D014506 ORTHO05D017765 0.0e+00 1501.1 958 100.0
Nitab4.5_0021381g0010 Nicotiana tabacum HOM05D014506 ORTHO05D286505 1.5e-51 209.1 134 85.8
Nitab4.5_0006021g0020 Nicotiana tabacum HOM05D014506 ORTHO05D283261 1.7e-44 185.7 305 43.3
Nitab4.5_0002189g0060 Nicotiana tabacum HOM05D014506 ORTHO05D285274 4.4e-40 171.0 99 89.9
Nitab4.5_0009353g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-36 157.9 327 37.9
Nitab4.5_0005337g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.6e-36 156.8 323 39.9
Nitab4.5_0007729g0030 Nicotiana tabacum HOM05D014506 ORTHO05D017765 4.4e-32 144.4 190 98.9
Nitab4.5_0003399g0020 Nicotiana tabacum HOM05D014506 ORTHO05D282731 1.1e-30 139.8 89 84.3
Nitab4.5_0001767g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.8e-26 125.2 145 53.1
PGSC0003DMG400028474 Solanum tuberosum HOM05D000021 ORTHO05D000010 6.0e-21 107.5 189 91.0
CAN.G411.75 Capsicum annuum HOM05D000021 ORTHO05D000010 6.6e-20 104.0 190 39.5
Sopen02g021350 Solanum pennellii HOM05D000021 ORTHO05D000010 6.6e-20 104.0 190 90.0
Solyc02g072400.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 8.6e-20 103.6 189 89.4
Nitab4.5_0002752g0080 Nicotiana tabacum HOM05D011440 ORTHO05D283697 1.5e-19 102.8 130 48.5
Peaxi162Scf00162g00211 Petunia axillaris HOM05D014506 ORTHO05D017765 4.3e-19 101.3 65 80.0
Nitab4.5_0001415g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.1e-18 99.0 262 33.2
PGSC0003DMG400028473 Solanum tuberosum HOM05D000021 ORTHO05D000010 3.6e-18 98.2 65 78.5
Nitab4.5_0003736g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.0e-17 94.7 187 53.5
Nitab4.5_0002684g0030 Nicotiana tabacum HOM05D014506 ORTHO05D017765 3.2e-14 85.1 63 71.4
Nitab4.5_0002185g0130 Nicotiana tabacum HOM05D000021 ORTHO05D000010 7.1e-14 84.0 47 85.1
CAN.G257.124 Capsicum annuum HOM05D000065 ORTHO05D017765 2.1e-13 82.4 65 66.2
Nitab4.5_0007564g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.0e-12 80.1 48 81.2
CAN.G411.79 Capsicum annuum HOM05D000021 ORTHO05D000010 6.2e-10 70.9 39 82.1
Nitab4.5_0002185g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.1e-09 68.6 187 32.6
Nitab4.5_0007736g0010 Nicotiana tabacum HOM05D015872 ORTHO05D282499 3.1e-09 68.6 135 37.8
Nitab4.5_0026546g0010 Nicotiana tabacum HOM05D015872 ORTHO05D285269 4.0e-09 68.2 48 68.8
Nitab4.5_0001129g0020 Nicotiana tabacum HOM05D015872 ORTHO05D285998 5.2e-09 67.8 54 63.0
Nitab4.5_0009388g0040 Nicotiana tabacum HOM05D015872 ORTHO05D284287 6.8e-09 67.4 102 43.1
Nitab4.5_0000577g0050 Nicotiana tabacum HOM05D015872 ORTHO05D283936 1.5e-08 66.2 110 40.0
Nitab4.5_0000825g0050 Nicotiana tabacum HOM05D015872 ORTHO05D283394 4.4e-08 64.7 47 66.0
Nitab4.5_0001424g0030 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.4e-08 64.7 190 81.1
Nitab4.5_0000336g0050 Nicotiana tabacum HOM05D011506 ORTHO05D284620 5.8e-08 64.3 289 30.1
Nitab4.5_0006160g0010 Nicotiana tabacum HOM05D011440 ORTHO05D282761 7.6e-08 63.9 128 34.4
Nitab4.5_0002291g0040 Nicotiana tabacum HOM05D011440 ORTHO05D284232 1.3e-07 63.2 130 34.6
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.9e-07 62.0 84 47.6
Nitab4.5_0000950g0020 Nicotiana tabacum HOM05D011440 ORTHO05D285860 3.7e-07 61.6 127 33.1
Nitab4.5_0003585g0010 Nicotiana tabacum HOM05D011440 ORTHO05D286838 4.9e-07 61.2 139 33.8
Nitab4.5_0006521g0010 Nicotiana tabacum HOM05D015872 ORTHO05D286564 4.9e-07 61.2 67 49.3
Nitab4.5_0000724g0030 Nicotiana tabacum HOM05D011506 ORTHO05D285897 8.4e-07 60.5 41 70.7
Nitab4.5_0002521g0060 Nicotiana tabacum HOM05D015872 ORTHO05D284606 1.4e-06 59.7 183 33.9
Nitab4.5_0002185g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.4e-06 58.9 29 89.7
Nitab4.5_0013762g0010 Nicotiana tabacum HOM05D000065 ORTHO05D000162 3.2e-06 58.5 46 63.0


User provided reference genes

Program Settings