Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.1e-78 296.6 159 100.0
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.7e-66 256.1 154 88.3
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.0e-63 246.9 154 85.7
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 8.8e-63 243.8 143 90.2
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.9e-58 228.8 154 81.8
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 6.6e-58 227.6 154 81.8
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 4.7e-56 221.5 154 78.6
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 6.0e-35 151.4 140 65.7
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 6.2e-32 141.4 144 56.2
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 5.2e-31 138.3 128 58.6
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 5.2e-31 138.3 128 58.6
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 4.4e-30 135.2 136 55.1
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.7e-29 133.3 137 55.5
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.9e-29 132.5 150 48.0
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.9e-28 129.8 145 50.3
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 3.2e-28 129.0 142 52.8
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 5.4e-28 128.3 145 49.7
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 5.4e-28 128.3 143 49.0
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 9.2e-28 127.5 153 51.0
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 1.2e-27 127.1 133 50.4
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.2e-27 127.1 128 53.9
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 2.1e-27 126.3 127 53.5
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.1e-27 126.3 148 51.4
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.7e-27 125.9 134 52.2
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.5e-27 125.6 141 50.4
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 3.5e-27 125.6 122 54.9
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 3.5e-27 125.6 145 49.0
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 7.8e-27 124.4 132 53.0
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.0e-26 124.0 153 48.4
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.0e-26 124.0 134 51.5
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.7e-26 123.2 129 51.2
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.7e-26 123.2 134 51.5
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 5.1e-26 121.7 138 50.0
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 6.6e-26 121.3 150 48.7
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.1e-25 120.6 137 51.1
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.9e-25 119.8 153 51.6
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.9e-25 119.8 128 55.5
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 1.9e-25 119.8 152 46.1
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 2.5e-25 119.4 118 55.9
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 3.3e-25 119.0 142 50.0
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.3e-25 119.0 139 50.4
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 4.3e-25 118.6 154 45.5
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.3e-25 118.6 135 52.6
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.3e-25 118.6 135 52.6
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.3e-25 118.6 135 52.6
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 7.3e-25 117.9 164 46.3
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.2e-24 117.1 158 48.7
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.6e-24 116.7 121 48.8
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 1.6e-24 116.7 146 49.3
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.6e-24 116.7 144 48.6
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.8e-24 115.9 145 44.8
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.8e-24 115.9 162 48.1
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 3.6e-24 115.5 135 51.1
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.7e-24 115.2 140 49.3
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 4.7e-24 115.2 121 50.4
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 6.2e-24 114.8 133 46.6
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.1e-23 114.0 145 43.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.1e-23 114.0 142 47.9
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.1e-23 114.0 139 45.3
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.4e-23 113.6 125 48.8
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.4e-23 113.6 137 48.2
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.4e-23 113.6 124 50.8
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 3.1e-23 112.5 116 52.6
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 4.0e-23 112.1 119 50.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 6.8e-23 111.3 141 46.1
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 8.9e-23 110.9 145 41.4
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.2e-22 110.5 145 41.4
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 2.6e-22 109.4 150 41.3
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 2.6e-22 109.4 122 50.0
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 3.4e-22 109.0 136 43.4
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.4e-22 108.6 124 52.4
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 4.4e-22 108.6 145 40.7
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 5.8e-22 108.2 150 41.3
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 9.9e-22 107.5 136 42.6
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.3e-21 107.1 163 43.6
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.3e-21 107.1 163 43.6
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 2.2e-21 106.3 150 40.7
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.2e-21 106.3 151 40.4
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 3.8e-21 105.5 114 50.9
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 6.4e-21 104.8 103 55.3
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 8.4e-21 104.4 151 39.7
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 1.4e-20 103.6 109 46.8
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.9e-20 103.2 109 51.4
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 4.2e-20 102.1 112 44.6
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.4e-20 101.7 134 42.5
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 9.3e-20 100.9 137 41.6
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.2e-19 100.5 151 40.4
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 2.1e-19 99.8 137 40.9
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 2.1e-19 99.8 134 41.8
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.0e-18 97.4 126 42.9
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 1.7e-18 96.7 102 50.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.1e-17 94.0 138 40.6
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-16 90.5 125 40.8
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.6e-16 89.0 105 46.7
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.6e-16 89.0 122 42.6
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 5.3e-15 85.1 91 49.5
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.2e-14 84.0 137 38.0
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 1.2e-14 84.0 81 53.1
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.5e-14 83.6 104 47.1
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.5e-14 83.6 153 37.9
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.6e-14 82.8 74 58.1
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 4.2e-12 75.5 97 45.4
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 2.7e-11 72.8 104 42.3
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 3.0e-10 69.3 104 39.4
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 6.6e-10 68.2 127 37.8
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 5.6e-09 65.1 73 46.6
SalBow1G0981 Salvia bowleyana HOM05D007364 ORTHO05D009275 4.0e-07 58.9 90 42.2


User provided reference genes

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