Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-58 229.9 123 100.0
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-42 176.0 134 76.1
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-42 175.3 142 72.5
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-42 174.9 148 70.3
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-39 164.1 123 77.2
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-38 162.9 148 67.6
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-38 161.0 148 64.2
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.9e-38 160.2 142 68.3
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-37 159.1 143 65.7
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-36 154.5 148 65.5
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-35 151.4 148 60.1
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-34 149.4 145 62.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-34 149.4 121 71.9
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-33 146.7 148 61.5
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-32 143.3 148 59.5
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-31 140.2 139 62.6
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-31 140.2 143 60.8
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-31 139.0 134 65.7
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-31 139.0 139 61.9
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-31 137.5 143 61.5
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-30 136.7 148 56.8
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-30 136.0 148 59.5
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-30 135.6 146 58.9
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-30 135.2 148 59.5
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-30 134.8 148 56.8
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-30 134.8 146 58.9
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-29 132.1 123 65.0
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-28 129.8 132 59.1
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-28 128.3 147 55.1
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-28 127.5 140 58.6
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-28 127.1 130 60.8
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-27 125.2 129 62.8
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-26 121.3 86 79.1
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-26 120.9 136 57.4
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-25 120.2 86 79.1
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-25 119.8 115 63.5
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-25 118.6 148 52.7
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-25 118.2 148 52.0
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.6e-24 116.3 82 78.0
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-24 115.9 125 56.8
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-24 115.5 145 53.8
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 6.3e-24 114.4 144 49.3
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-24 114.4 120 60.0
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-24 114.0 130 54.6
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-23 113.6 137 56.9
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-23 112.8 132 54.5
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-23 112.1 114 60.5
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-23 111.3 131 55.0
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-23 110.5 107 62.6
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-22 107.8 131 54.2
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-22 107.5 130 53.1
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-21 106.7 120 53.3
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-21 105.9 123 49.6
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-21 105.9 128 55.5
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-21 105.5 117 57.3
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-21 104.4 129 55.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-20 102.8 130 50.0
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-20 100.9 151 45.7
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 1.2e-19 100.1 146 45.2
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.7e-19 99.0 137 46.0
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-18 96.7 122 50.0
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 3.9e-18 95.1 148 43.9
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-18 95.1 70 71.4
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 5.1e-18 94.7 144 45.8
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.1e-17 93.6 141 44.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-17 92.4 151 43.0
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-16 90.1 65 76.9
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.8e-16 88.2 128 47.7
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-15 87.0 137 42.3
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-15 86.7 105 55.2
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-15 86.7 98 58.2
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-15 86.3 147 40.8
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-15 86.3 145 42.1
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-15 85.5 147 42.2
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-15 85.5 108 51.9
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.1e-15 85.1 137 43.1
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-15 84.7 141 42.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.2e-14 83.6 145 40.7
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-14 83.2 124 46.8
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-14 82.8 62 74.2
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-14 82.4 62 79.0
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 5.9e-14 81.3 125 44.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-14 80.9 151 39.7
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-13 80.5 136 41.9
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-13 79.7 97 52.6
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-13 79.3 137 40.9
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-13 78.6 133 39.1
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-13 77.8 86 59.3
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-13 77.8 104 51.9
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-12 77.0 150 38.7
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-12 76.6 84 54.8
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-12 76.3 123 42.3
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-12 76.3 147 40.8
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 4.2e-12 75.1 132 40.9
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 7.2e-12 74.3 119 44.5
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 7.2e-12 74.3 119 44.5
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-11 73.6 82 48.8
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-11 72.0 127 40.9
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-11 71.2 65 64.6
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-10 70.5 142 37.3
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-10 70.5 150 36.0
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 2.3e-10 69.3 72 55.6
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-10 68.9 150 35.3
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-10 68.6 96 50.0
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.9e-10 68.6 150 36.0
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-10 67.8 135 40.0
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.2 86 51.2
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.2 135 39.3
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.2 53 73.6
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.3e-09 65.5 69 56.5
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-09 65.1 150 34.7
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-09 64.7 88 40.9
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 5.7e-09 64.7 149 36.2
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 7.4e-09 64.3 155 36.1
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-09 64.3 118 37.3
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 7.4e-09 64.3 115 41.7
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-09 63.9 78 53.8
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-08 63.5 150 36.7
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-08 63.5 55 63.6
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-08 63.2 86 50.0
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-08 63.2 86 51.2
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-08 63.2 42 78.6
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-08 63.2 150 36.0
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-08 62.8 113 44.2
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-08 62.8 150 32.7
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.7e-08 62.0 146 34.2
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.8e-08 61.6 150 33.3
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.8e-08 61.6 155 32.9
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-08 61.2 150 33.3
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 8.2e-08 60.8 150 34.7
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 8.2e-08 60.8 150 35.3
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.4e-07 60.1 108 40.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.4e-07 60.1 150 34.7
Nitab4.5_0000141g0160 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-07 59.3 89 42.7
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-07 58.5 150 30.7
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-07 58.2 120 36.7
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 7.0e-07 57.8 65 52.3
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-07 57.4 50 64.0
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-06 55.1 163 30.7
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 4.5e-06 55.1 90 43.3
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-06 54.7 110 36.4
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.9e-06 54.7 101 34.7
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 7.7e-06 54.3 107 39.3
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-06 54.3 49 55.1
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-06 54.3 54 66.7


User provided reference genes

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