Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.2e-102 376.7 216 100.0
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.3e-76 288.9 214 79.9
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.3e-61 239.6 218 67.0
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 5.0e-61 238.4 222 68.0
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.5e-60 236.1 217 65.9
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.2e-57 227.3 216 64.4
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.5e-41 173.7 223 52.5
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 9.3e-39 164.5 231 53.2
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 4.6e-38 162.2 218 51.8
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.0e-37 161.0 234 49.6
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 3.0e-37 159.5 231 51.5
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 5.1e-37 158.7 223 53.4
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 6.6e-37 158.3 88 86.4
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 6.6e-37 158.3 218 51.8
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.9e-36 156.8 237 48.1
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 4.3e-36 155.6 225 48.4
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.3e-35 154.1 238 53.4
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.1e-35 153.3 216 50.5
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 4.8e-35 152.1 236 44.5
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 1.1e-34 151.0 214 49.5
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.1e-34 151.0 218 50.9
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.4e-34 150.6 233 48.1
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 4.0e-34 149.1 239 48.5
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.2e-33 147.5 239 43.1
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.2e-33 147.5 239 43.1
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 3.4e-33 146.0 264 50.0
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.3e-32 144.1 230 45.7
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 1.7e-32 143.7 252 42.5
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 2.2e-32 143.3 253 47.4
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 2.2e-32 143.3 233 43.8
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 2.9e-32 142.9 198 52.5
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 3.8e-32 142.5 226 46.5
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 4.9e-32 142.1 241 43.2
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 4.9e-32 142.1 239 42.7
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 4.9e-32 142.1 232 49.1
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 4.9e-32 142.1 236 42.8
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 6.4e-32 141.7 222 47.3
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 8.4e-32 141.4 235 49.4
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 8.4e-32 141.4 258 48.1
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.4e-31 140.6 226 50.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.2e-31 139.4 267 46.1
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 3.2e-31 139.4 224 43.8
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.2e-30 137.5 240 48.8
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 1.2e-30 137.5 273 39.9
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 2.1e-30 136.7 200 46.5
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 4.6e-30 135.6 218 41.3
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 6.0e-30 135.2 269 47.2
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 6.0e-30 135.2 247 39.7
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.0e-29 134.4 220 42.7
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.0e-29 134.4 240 47.1
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 1.0e-29 134.4 230 50.9
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.3e-29 134.0 222 47.7
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 1.8e-29 133.7 236 45.3
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.8e-29 133.7 231 48.9
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 2.3e-29 133.3 236 43.6
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 3.9e-29 132.5 231 45.9
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 6.7e-29 131.7 213 41.8
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 6.7e-29 131.7 242 38.8
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.7e-29 131.3 82 76.8
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 1.1e-28 131.0 238 41.2
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-28 130.6 219 41.6
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.5e-28 130.6 219 41.6
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.5e-28 130.6 238 49.2
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.5e-28 130.6 219 41.1
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 1.9e-28 130.2 231 42.0
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 1.9e-28 130.2 220 43.6
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 1.9e-28 130.2 208 43.8
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.5e-28 129.8 244 42.2
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 3.3e-28 129.4 259 45.2
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 3.3e-28 129.4 221 42.5
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 4.3e-28 129.0 215 41.9
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.6e-28 128.6 231 48.1
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 5.6e-28 128.6 221 43.9
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 7.4e-28 128.3 237 45.1
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 9.6e-28 127.9 261 45.2
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 9.6e-28 127.9 221 43.9
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 1.6e-27 127.1 253 40.7
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 2.1e-27 126.7 218 41.3
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.1e-27 126.7 228 41.7
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 2.8e-27 126.3 237 46.8
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 4.8e-27 125.6 245 40.8
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 8.1e-27 124.8 86 69.8
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-26 124.4 213 41.3
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.1e-26 124.4 227 41.4
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.1e-26 124.4 222 39.2
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 1.4e-26 124.0 195 42.1
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 1.8e-26 123.6 217 43.8
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 1.8e-26 123.6 214 46.3
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 2.4e-26 123.2 256 44.1
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 3.1e-26 122.9 225 43.1
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 4.0e-26 122.5 166 54.2
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 4.0e-26 122.5 244 43.9
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 5.3e-26 122.1 218 39.9
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 5.3e-26 122.1 216 39.8
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 6.9e-26 121.7 98 61.2
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 6.9e-26 121.7 90 68.9
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 1.2e-25 120.9 214 41.6
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.2e-25 120.9 209 43.1
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.6e-25 119.8 89 61.8
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.6e-25 119.8 79 72.2
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 3.4e-25 119.4 212 39.6
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 4.5e-25 119.0 214 39.7
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 4.5e-25 119.0 73 78.1
Nitab4.5_0000893g0100 Nicotiana tabacum HOM05D004801 ORTHO05D005747 7.6e-25 118.2 105 71.4
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 7.6e-25 118.2 169 53.8
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 9.9e-25 117.9 228 39.0
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 9.9e-25 117.9 89 66.3
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 1.7e-24 117.1 213 41.3
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 2.2e-24 116.7 245 37.1
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.2e-24 116.7 98 61.2
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 2.2e-24 116.7 98 62.2
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.2e-24 116.7 223 38.1
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 3.8e-24 115.9 225 44.0
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 4.9e-24 115.5 213 40.4
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 4.9e-24 115.5 243 39.9
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 8.4e-24 114.8 213 40.4
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 8.4e-24 114.8 212 42.0
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.9e-23 113.6 210 39.5
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.9e-23 113.6 210 39.5
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.9e-23 113.6 242 43.4
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 2.4e-23 113.2 209 48.3
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 4.2e-23 112.5 85 62.4
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 5.5e-23 112.1 198 48.5
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 7.1e-23 111.7 76 65.8
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 7.1e-23 111.7 229 35.8
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 2.7e-22 109.8 229 40.2
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.0e-21 107.8 238 39.5
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 2.3e-21 106.7 88 60.2
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 5.1e-21 105.5 235 39.1
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 5.3e-18 95.5 210 36.7
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 5.3e-18 95.5 210 36.7
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 6.9e-18 95.1 99 46.5
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 9.0e-18 94.7 209 34.4
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 5.8e-17 92.0 67 64.2
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.3e-16 90.9 73 58.9
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 1.3e-16 90.9 251 33.5
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.1e-15 87.8 184 37.0
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 4.2e-15 85.9 97 48.5
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.3e-13 80.1 106 44.3
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.7e-11 72.8 199 34.2
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 7.6e-09 65.1 209 31.1
BcaC08g44096 Brassica carinata HOM05D004801 ORTHO05D005747 2.1e-06 57.0 64 48.4


User provided reference genes

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