Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 0.0e+00 1219.5 678 100.0
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 3.5e-286 988.0 678 86.0
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 3.2e-247 858.6 660 77.1
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 3.1e-242 842.0 746 68.6
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 1.8e-237 826.2 745 68.1
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.7e-166 589.3 661 49.6
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 2.5e-162 576.6 661 49.6
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 9.3e-162 574.7 660 49.4
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.8e-160 570.5 646 50.0
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 5.3e-157 558.9 661 48.6
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 2.5e-151 540.0 658 49.5
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 2.6e-148 530.0 661 47.0
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 1.3e-147 527.7 675 46.2
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 5.0e-147 525.8 656 46.5
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 2.1e-145 520.4 665 45.6
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 3.6e-145 519.6 661 45.7
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 3.6e-145 519.6 653 45.9
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 4.6e-145 519.2 653 45.8
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.4e-144 517.7 662 45.3
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.0e-144 516.5 656 47.3
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.0e-144 516.5 656 47.3
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 9.7e-143 511.5 656 45.4
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 6.3e-142 508.8 661 44.9
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 1.4e-141 507.7 557 51.3
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 4.5e-140 502.7 640 46.2
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 7.7e-140 501.9 661 43.9
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 3.8e-139 499.6 663 44.2
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 1.6e-137 494.2 662 44.7
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 3.6e-137 493.0 521 51.8
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 9.7e-135 485.0 662 43.2
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 3.1e-133 479.9 661 43.4
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 5.9e-132 475.7 662 43.1
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 2.5e-130 470.3 683 42.0
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.2e-130 468.8 662 42.6
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.6e-129 467.6 470 52.8
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 4.7e-129 466.1 658 44.1
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 1.4e-128 464.5 666 42.5
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 5.2e-128 462.6 664 44.3
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 2.0e-127 460.7 656 42.1
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 8.2e-126 455.3 523 48.9
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.4e-125 454.5 657 42.3
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 1.8e-125 454.1 673 42.1
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.2e-119 434.9 516 45.9
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 3.4e-119 433.3 517 47.4
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 6.3e-118 429.1 660 42.1
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 2.0e-116 424.1 669 39.6
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 1.2e-105 388.3 507 45.2
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 8.0e-105 385.6 463 47.3
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 1.4e-104 384.8 603 40.3
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 3.0e-104 383.6 466 47.4
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 3.2e-101 373.6 463 46.7
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.2e-89 335.1 516 38.6
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 1.1e-82 312.0 326 49.1
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 9.5e-82 308.9 449 42.8
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 5.2e-80 303.1 286 51.7
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 6.8e-80 302.8 463 40.0
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.0e-79 301.2 288 55.9
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 1.1e-72 278.9 510 36.3
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 5.2e-72 276.6 438 39.5
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 5.1e-67 260.0 503 34.0
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 2.4e-64 251.1 241 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 5.6e-50 203.4 580 28.6
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 7.6e-47 193.0 471 29.9
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.4e-40 171.4 175 51.4
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 7.6e-39 166.4 129 63.6
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 2.2e-38 164.9 133 56.4
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 5.5e-37 160.2 253 38.7
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 3.6e-36 157.5 104 73.1
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 2.2e-30 138.3 221 38.0
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 7.4e-26 123.2 140 50.0
Oeu008971.1 Olea europaea HOM05D007837 ORTHO05D009965 1.7e-25 122.1 101 60.4
GSVIVG01037970001 Vitis vinifera HOM05D007837 ORTHO05D009965 3.1e-24 117.9 105 58.1
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 4.1e-24 117.5 119 55.5
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 6.3e-17 93.6 140 42.1
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 1.6e-15 89.0 63 65.1
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.0e-15 88.6 91 53.8
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 2.0e-15 88.6 63 65.1
Sabra11G0145800 Salix brachista HOM05D007837 ORTHO05D009965 2.5e-13 81.6 114 40.4
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.3e-11 75.1 71 50.7
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.5e-10 72.4 260 24.6
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.5e-10 72.4 260 24.6
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.7e-10 70.5 357 23.8
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 6.3e-09 67.0 267 23.6
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.1e-08 66.2 142 31.7
TAR371G0483 Trochodendron aralioides HOM05D001154 ORTHO05D010892 5.3e-08 63.9 40 67.5
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 4.5e-07 60.8 255 23.9
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 5.9e-07 60.5 127 29.1
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 5.9e-07 60.5 270 23.7
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 7.7e-07 60.1 146 29.5
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.0e-06 59.7 286 23.4
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 1.7e-06 58.9 409 21.5
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.2e-06 58.5 258 23.6
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.2e-06 58.5 117 30.8
Cpa.g.sc192.14 Carica papaya HOM05D007837 ORTHO05D009965 2.9e-06 58.2 57 56.1
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.8e-06 57.8 271 24.4
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 6.5e-06 57.0 201 23.9


User provided reference genes

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