Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.9e-266 920.6 475 100.0
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-243 845.9 520 87.5
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 4.8e-221 771.2 440 90.2
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 2.1e-213 745.7 457 86.2
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.5e-211 739.6 454 85.7
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.0e-211 739.2 454 85.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 8.4e-210 733.8 456 84.9
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.2e-209 731.9 457 84.5
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 4.2e-209 731.5 449 83.1
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.2e-201 704.9 462 79.9
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 9.3e-201 703.7 462 79.4
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-200 703.4 444 81.5
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.8e-197 692.2 432 82.4
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.7e-192 675.6 457 78.3
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.5e-190 669.1 445 77.1
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.2e-179 633.6 456 73.9
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-175 620.5 462 71.0
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 5.2e-175 618.2 462 70.8
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.6e-174 615.9 421 76.0
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.4e-172 610.1 429 73.9
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 7.0e-172 607.8 448 71.0
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.1e-172 607.4 424 74.3
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 8.0e-168 594.3 418 73.9
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.2e-166 590.5 385 77.1
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.3e-165 587.0 426 71.6
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 5.9e-163 578.2 420 71.7
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.0e-162 577.4 391 77.0
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.0e-162 577.4 391 76.7
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.9e-162 575.9 398 74.9
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 3.8e-162 575.5 388 76.5
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 6.5e-162 574.7 381 76.6
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.1e-161 573.9 444 69.6
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.1e-161 573.9 453 68.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 9.4e-161 570.9 391 75.7
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.1e-160 569.7 415 71.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.1e-160 569.7 391 74.2
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 4.0e-159 565.5 454 67.4
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.5e-158 563.5 381 75.3
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.5e-158 563.5 426 70.0
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 7.5e-158 561.2 404 71.5
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.3e-157 560.5 450 67.3
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.7e-157 560.1 410 71.5
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 6.3e-157 558.1 382 76.7
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 1.4e-156 557.0 394 73.1
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.8e-156 556.6 412 70.6
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.8e-156 556.6 382 76.7
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.4e-156 556.2 417 70.0
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.4e-156 556.2 497 61.2
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.1e-156 555.4 420 70.0
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 7.0e-156 554.7 416 69.5
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.2e-155 553.9 428 68.0
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.2e-155 553.9 401 70.3
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.0e-155 553.1 395 73.4
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 7.7e-155 551.2 407 69.8
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.3e-154 550.4 370 76.5
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.7e-154 550.1 406 70.9
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.5e-154 547.7 416 69.2
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.9e-153 546.6 458 64.8
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 3.2e-153 545.8 419 69.2
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 7.2e-153 544.7 421 69.4
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.2e-152 543.9 441 67.6
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.2e-152 543.9 360 77.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.1e-152 541.6 418 70.1
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 8.0e-152 541.2 396 72.2
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.0e-151 540.8 390 71.3
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.0e-151 540.8 469 62.9
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.0e-151 540.8 404 70.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.8e-151 540.0 419 68.7
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.2e-151 538.5 404 70.8
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.2e-147 527.3 393 71.2
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.0e-147 526.6 371 74.1
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 7.8e-147 524.6 482 60.2
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.9e-145 520.0 422 66.4
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.5e-145 519.6 503 58.8
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 2.5e-145 519.6 372 73.7
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.6e-144 516.9 418 66.0
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 3.6e-144 515.8 397 69.3
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 8.0e-144 514.6 397 68.8
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 5.2e-143 511.9 398 67.6
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 8.3e-141 504.6 331 77.6
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.4e-140 501.9 331 77.0
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 2.5e-129 466.5 403 62.0
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 3.6e-128 462.6 390 64.1
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 5.2e-127 458.8 466 57.1
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 6.4e-125 451.8 380 62.4
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 6.4e-125 451.8 380 61.3
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.2e-124 449.5 452 56.9
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.2e-123 447.6 414 59.7
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.4e-119 434.1 377 62.6
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 8.4e-117 424.9 374 65.5
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.1e-116 424.5 467 53.3
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.0e-114 417.9 400 58.2
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.7e-112 409.1 403 58.3
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 3.1e-111 406.4 419 56.3
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.5e-110 404.1 420 56.4
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.5e-110 404.1 420 56.4
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 2.6e-110 403.3 418 55.5
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-109 401.0 415 55.7
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 4.9e-109 399.1 464 51.5
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 4.9e-101 372.5 390 55.1
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 4.9e-101 372.5 390 55.1
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 1.0e-98 364.8 418 51.2
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.9e-97 360.5 377 54.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 7.4e-97 358.6 372 55.1
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 7.4e-97 358.6 372 55.1
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.4e-87 327.8 297 59.6
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.2e-85 320.5 239 71.1
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-84 318.2 235 69.4
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.5e-65 254.6 362 40.6
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 8.5e-61 238.8 158 78.5
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 4.5e-54 216.5 139 77.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 7.7e-54 215.7 428 36.4
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.4e-52 208.8 416 38.9
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.6e-51 208.0 398 35.7
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 3.6e-43 180.3 123 72.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 6.1e-43 179.5 390 35.9
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-42 178.3 125 72.8
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.2e-41 175.3 235 47.7
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 2.6e-41 174.1 152 57.2
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.3e-40 171.8 115 76.5
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 9.5e-36 155.6 122 65.6
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 7.5e-33 146.0 196 45.9
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 9.8e-25 119.0 126 54.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.7e-24 117.1 309 30.4
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.2e-22 112.1 78 71.8
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.6e-19 101.7 81 66.7
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.9e-09 65.9 48 64.6
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 9.9e-09 65.9 384 24.5
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 1.3e-08 65.5 235 25.1
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 3.7e-08 63.9 280 27.1
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.1e-07 62.4 273 26.4
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.4e-07 62.0 60 53.3
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.4e-07 61.2 268 25.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.2e-07 60.8 268 25.0
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 7.1e-07 59.7 408 23.0
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 2.7e-06 57.8 347 23.1
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.7e-06 57.8 277 26.0
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 6.0e-06 56.6 402 22.6
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 6.0e-06 56.6 272 26.5


User provided reference genes

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