Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 9.6e-68 260.0 128 100.0
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.5e-65 252.7 128 96.9
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-64 249.6 128 94.5
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.0e-56 223.4 121 87.6
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.2e-56 222.2 121 86.8
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.2e-56 222.2 121 86.8
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.9e-55 219.2 124 84.7
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 9.3e-55 216.9 123 85.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.1e-46 189.1 124 71.8
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.0e-45 185.3 122 76.2
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 3.7e-43 178.3 121 71.1
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 8.2e-43 177.2 122 73.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 4.1e-42 174.9 122 72.1
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 4.1e-42 174.9 122 73.0
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 5.3e-42 174.5 122 71.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 5.3e-42 174.5 122 71.3
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.5e-41 172.9 121 66.9
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.5e-41 172.9 123 69.1
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.6e-41 172.2 122 72.1
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.5e-41 171.4 122 70.5
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 5.9e-41 171.0 117 69.2
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.3e-40 169.9 122 71.3
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.7e-40 169.5 122 71.3
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 2.2e-40 169.1 122 68.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.1e-39 166.8 124 67.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.1e-39 166.8 122 68.0
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.4e-39 166.4 117 72.6
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 4.2e-39 164.9 114 67.5
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 4.2e-39 164.9 122 66.4
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 4.2e-39 164.9 120 68.3
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 5.5e-39 164.5 114 70.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.2e-38 163.3 121 69.4
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.6e-38 162.9 122 68.9
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.6e-38 162.9 113 72.6
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 3.6e-38 161.8 123 67.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 3.6e-38 161.8 122 66.4
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 4.6e-38 161.4 109 69.7
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 6.1e-38 161.0 122 67.2
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 6.1e-38 161.0 124 63.7
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 7.9e-38 160.6 123 65.9
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.0e-37 160.2 122 63.1
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.4e-37 159.8 122 65.6
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.3e-37 159.1 122 63.9
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 3.0e-37 158.7 122 66.4
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 3.0e-37 158.7 122 64.8
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 3.9e-37 158.3 116 69.0
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 3.9e-37 158.3 123 65.9
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 5.1e-37 157.9 114 67.5
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 5.1e-37 157.9 123 67.5
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 5.1e-37 157.9 122 64.8
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 6.7e-37 157.5 122 64.8
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.1e-36 156.8 117 65.0
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.5e-36 156.4 122 61.5
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 2.5e-36 155.6 120 66.7
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.5e-36 155.6 122 66.4
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 3.3e-36 155.2 120 66.7
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 5.7e-36 154.5 114 64.0
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 5.7e-36 154.5 114 64.0
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 7.4e-36 154.1 120 65.8
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 7.4e-36 154.1 121 65.3
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 9.7e-36 153.7 117 65.8
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.3e-35 153.3 122 63.9
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.7e-35 152.9 122 65.6
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 2.8e-35 152.1 123 63.4
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 4.8e-35 151.4 122 59.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 4.8e-35 151.4 122 59.8
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 4.8e-35 151.4 122 61.5
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 4.8e-35 151.4 117 61.5
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 4.8e-35 151.4 117 61.5
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.8e-34 149.4 122 61.5
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 2.4e-34 149.1 117 62.4
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 3.1e-34 148.7 122 58.2
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 4.1e-34 148.3 118 65.3
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 5.3e-34 147.9 117 61.5
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.2e-33 146.7 118 64.4
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.2e-33 146.7 120 60.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.2e-33 146.7 118 59.3
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.5e-33 146.4 120 65.0
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.5e-33 146.4 122 61.5
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.6e-33 145.6 117 65.0
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 7.7e-33 144.1 121 60.3
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.0e-32 143.7 120 60.8
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 3.8e-32 141.7 126 58.7
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 8.5e-32 140.6 128 57.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.1e-31 140.2 115 60.9
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.9e-31 139.4 120 60.0
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 2.5e-31 139.0 93 71.0
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 7.2e-31 137.5 122 62.3
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 9.4e-31 137.1 106 65.1
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.7e-30 135.6 126 57.9
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.7e-30 135.6 87 69.0
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 3.6e-30 135.2 109 61.5
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 7.9e-30 134.0 114 56.1
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.4e-29 133.3 120 57.5
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.4e-29 133.3 100 64.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.3e-29 132.5 112 57.1
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 3.0e-29 132.1 125 58.4
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.6e-28 129.0 93 67.7
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 4.4e-28 128.3 86 70.9
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-25 120.2 78 69.2
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.1e-23 113.6 72 73.6
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.4e-21 106.7 80 66.2
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.8e-21 106.3 69 68.1
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 9.1e-18 94.0 103 45.6
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.5e-17 91.7 85 54.1
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.1e-14 82.8 56 67.9
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.3e-11 73.6 83 45.8
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 1.8e-10 69.7 69 42.0
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 4.1e-10 68.6 54 53.7
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 7.0e-10 67.8 63 38.1
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.7e-08 63.2 89 37.1


User provided reference genes

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