Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011704g0010 Nicotiana tabacum HOM05D000311 ORTHO05D000183 1.3e-57 226.1 112 100.0
Oeu029750.1 Olea europaea HOM05D000311 ORTHO05D000183 1.8e-17 92.8 111 49.5
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 7.5e-16 87.4 114 43.0
Nitab4.5_0003058g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 4.1e-14 81.6 120 39.2
Nitab4.5_0001621g0050 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.0e-13 79.3 125 41.6
Solyc08g016210.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 2.0e-13 79.3 48 83.3
PGSC0003DMG400032785 Solanum tuberosum HOM05D000311 ORTHO05D000183 2.0e-13 79.3 48 83.3
Gohir.D02G026566 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.5e-13 78.2 125 40.8
HanXRQChr04g0097591 Helianthus annuus HOM05D000311 ORTHO05D000183 4.5e-13 78.2 110 42.7
Sopen08g006550 Solanum pennellii HOM05D000311 ORTHO05D000183 4.5e-13 78.2 48 81.2
Nitab4.5_0010327g0010 Nicotiana tabacum HOM05D000311 ORTHO05D000183 7.7e-13 77.4 48 81.2
Peaxi162Scf00152g01341 Petunia axillaris HOM05D000311 ORTHO05D000183 1.0e-12 77.0 68 54.4
Sopen04g006530 Solanum pennellii HOM05D000311 ORTHO05D000183 1.3e-12 76.6 48 79.2
Nitab4.5_0000348g0230 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.2e-12 75.9 48 79.2
Peaxi162Scf01205g00183 Petunia axillaris HOM05D000311 ORTHO05D000183 2.2e-12 75.9 48 79.2
PGSC0003DMG400005590 Solanum tuberosum HOM05D000311 ORTHO05D000183 2.2e-12 75.9 48 79.2
CAN.G525.22 Capsicum annuum HOM05D000311 ORTHO05D000183 3.8e-12 75.1 48 77.1
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 3.8e-12 75.1 112 41.1
Solyc08g016310.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 5.0e-12 74.7 48 79.2
PGSC0003DMG400030150 Solanum tuberosum HOM05D000311 ORTHO05D000183 5.0e-12 74.7 48 79.2
Solyc04g014400.4 Solanum lycopersicum HOM05D000311 ORTHO05D000183 1.1e-11 73.6 48 77.1
Nitab4.5_0007230g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 1.5e-11 73.2 48 77.1
CAN.G525.20 Capsicum annuum HOM05D000311 ORTHO05D000183 7.2e-11 70.9 48 70.8
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 1.2e-10 70.1 109 41.3
BolC6t38467H Brassica oleracea HOM05D000311 ORTHO05D000183 1.2e-10 70.1 109 41.3
Duzib187G0962 Durio zibethinus HOM05D000311 ORTHO05D000183 1.6e-10 69.7 109 38.5
CAN.G3566.2 Capsicum annuum HOM05D000311 ORTHO05D000183 2.7e-10 68.9 48 68.8
CAN.G525.24 Capsicum annuum HOM05D000311 ORTHO05D000183 2.7e-10 68.9 48 68.8
CAN.G525.26 Capsicum annuum HOM05D000311 ORTHO05D000183 2.7e-10 68.9 48 68.8
Duzib212G0621 Durio zibethinus HOM05D000311 ORTHO05D000183 6.1e-10 67.8 61 54.1
Gorai.004G051800 Gossypium raimondii HOM05D000311 ORTHO05D000183 8.0e-10 67.4 107 41.1
QL04p004403 Quercus lobata HOM05D000311 ORTHO05D000183 1.0e-09 67.0 136 35.3
GSVIVG01012806001 Vitis vinifera HOM05D000191 ORTHO05D000122 1.0e-09 67.0 95 42.1
Eucgr.C04317 Eucalyptus grandis HOM05D000311 ORTHO05D000183 1.8e-09 66.2 109 37.6
Gohir.A10G217200 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.0e-09 65.1 110 37.3
Hma1.2p1_0949F.1_g240700 Hydrangea macrophylla HOM05D000311 ORTHO05D000183 5.2e-09 64.7 102 39.2
QL04p004370 Quercus lobata HOM05D000311 ORTHO05D000183 8.8e-09 63.9 136 32.4
Oeu029749.1 Olea europaea HOM05D000311 ORTHO05D000183 1.5e-08 63.2 61 50.8
QL04p004418 Quercus lobata HOM05D000311 ORTHO05D000183 4.4e-08 61.6 136 31.6
Gohir.A10G216900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.5e-08 60.8 46 63.0
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 3.7e-07 58.5 134 30.6
Sopen08g006730 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 58.5 61 49.2
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.8e-07 58.2 48 56.2
Gohir.D10G225865 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.8e-07 58.2 46 60.9
Eucgr.C04320 Eucalyptus grandis HOM05D000311 ORTHO05D000183 6.3e-07 57.8 111 34.2
Gohir.A05G389900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 6.3e-07 57.8 46 63.0
Gorai.010G228600 Gossypium raimondii HOM05D000311 ORTHO05D000183 8.3e-07 57.4 110 31.8
Nn2g15981 Nelumbo nucifera HOM05D000311 ORTHO05D000183 8.3e-07 57.4 76 44.7
CiPaw.02G049300 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.1e-06 57.0 115 33.9
CiPaw.12G006600 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.1e-06 57.0 112 33.9
Gohir.D06G196132 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.1e-06 57.0 112 32.1
Gorai.004G053700 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.1e-06 57.0 46 60.9
Dinv19809 Davidia involucrata HOM05D000311 ORTHO05D000183 1.4e-06 56.6 46 60.9
Dinv35864 Davidia involucrata HOM05D000311 ORTHO05D000183 1.4e-06 56.6 46 60.9
Manes.11G060199 Manihot esculenta HOM05D000311 ORTHO05D000183 1.4e-06 56.6 132 32.6
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.4e-06 55.8 48 54.2
Gohir.A06G188366 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.4e-06 55.8 112 28.6
Dinv08773 Davidia involucrata HOM05D000311 ORTHO05D000183 3.1e-06 55.5 35 68.6
MSTRG.22507 Avicennia marina HOM05D000029 ORTHO05D002586 5.4e-06 54.7 93 37.6
CSS0028153 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 5.4e-06 54.7 48 52.1
Gorai.011G257100 Gossypium raimondii HOM05D000311 ORTHO05D000183 5.4e-06 54.7 45 62.2
Oeu009453.1 Olea europaea HOM05D000311 ORTHO05D000183 5.4e-06 54.7 88 36.4
Dinv19812 Davidia involucrata HOM05D000311 ORTHO05D000183 9.1e-06 53.9 46 58.7


User provided reference genes

Program Settings