Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 9.3e-155 550.4 334 100.0
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 2.3e-121 439.5 334 86.2
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 6.3e-111 404.8 335 77.9
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 1.1e-102 377.5 335 73.1
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.9e-100 369.4 347 73.8
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.6e-98 363.6 366 70.2
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 2.1e-98 363.2 366 69.4
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 3.8e-92 342.4 366 67.8
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 1.9e-91 340.1 338 58.0
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 1.4e-86 323.9 391 61.6
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.2e-82 310.8 365 62.5
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.4e-70 270.8 219 87.7
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 8.1e-66 255.0 340 48.5
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.0e-64 250.4 342 46.5
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.6e-64 250.0 191 69.1
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 5.8e-64 248.8 341 47.5
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.3e-59 233.0 342 44.4
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 5.6e-59 232.3 350 42.3
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 5.8e-56 222.2 345 44.3
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 1.3e-55 221.1 340 42.1
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 2.9e-55 219.9 341 42.5
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 1.9e-54 217.2 342 40.6
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 2.4e-54 216.9 338 39.6
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 2.4e-54 216.9 394 45.4
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 2.4e-54 216.9 355 40.8
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 3.2e-54 216.5 321 42.1
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 4.1e-54 216.1 338 43.2
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 9.2e-54 214.9 389 39.3
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 2.1e-53 213.8 341 41.6
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 3.5e-53 213.0 343 41.7
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 2.3e-52 210.3 338 41.4
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 5.1e-52 209.1 389 39.6
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.5e-51 207.6 342 42.1
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 2.5e-51 206.8 341 41.9
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 5.6e-51 205.7 333 40.5
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 5.6e-51 205.7 345 42.3
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 9.6e-51 204.9 393 38.7
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 1.6e-50 204.1 365 38.4
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 4.7e-50 202.6 344 40.1
Nitab4.5_0001315g0090 Nicotiana tabacum HOM05D004296 ORTHO05D005045 4.7e-50 202.6 179 91.1
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 6.2e-50 202.2 322 41.0
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 1.4e-49 201.1 329 40.1
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 1.8e-49 200.7 330 40.6
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 8.9e-49 198.4 342 41.2
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 8.9e-49 198.4 329 40.1
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 1.2e-48 198.0 329 39.8
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 2.0e-48 197.2 329 40.1
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 2.6e-48 196.8 336 39.6
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 4.4e-48 196.1 342 38.6
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 2.9e-47 193.4 323 39.3
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 3.8e-47 193.0 325 39.7
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 3.2e-46 189.9 351 40.5
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 5.4e-46 189.1 338 39.3
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 9.3e-46 188.3 349 40.1
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 1.2e-45 188.0 341 39.0
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 2.1e-45 187.2 337 38.9
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 3.5e-45 186.4 117 75.2
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 4.6e-45 186.0 352 39.5
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 1.3e-44 184.5 339 40.4
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 1.3e-44 184.5 347 46.7
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.3e-44 184.5 337 37.4
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 1.7e-44 184.1 350 38.0
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 2.3e-44 183.7 298 39.3
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.0e-44 183.3 315 36.5
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 3.0e-44 183.3 340 37.9
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 5.1e-44 182.6 313 36.7
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 8.7e-44 181.8 338 37.0
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 2.5e-43 180.3 353 40.5
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 3.3e-43 179.9 339 37.5
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 1.3e-42 177.9 342 38.0
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 1.6e-42 177.6 338 34.3
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.1e-42 177.2 331 36.6
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 2.1e-42 177.2 337 37.1
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 8.1e-42 175.3 340 35.0
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 2.4e-41 173.7 160 53.1
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 4.0e-41 172.9 361 35.7
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 5.3e-41 172.6 340 39.7
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 6.9e-41 172.2 338 35.8
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 1.2e-40 171.4 361 36.6
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 2.0e-40 170.6 332 38.3
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 2.0e-40 170.6 341 42.2
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.6e-40 170.2 173 56.6
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 2.6e-40 170.2 334 35.9
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 2.6e-40 170.2 344 36.0
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 3.4e-40 169.9 339 34.8
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 5.8e-40 169.1 333 37.8
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 7.6e-40 168.7 173 56.1
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 9.9e-40 168.3 178 48.3
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 1.3e-39 167.9 151 54.3
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 4.9e-39 166.0 356 34.8
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 1.1e-38 164.9 341 34.0
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 3.2e-38 163.3 326 33.4
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 7.1e-38 162.2 335 35.2
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 9.3e-38 161.8 290 38.6
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.1e-37 160.6 323 33.4
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 2.7e-37 160.2 374 41.7
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 4.6e-37 159.5 336 34.5
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 1.0e-36 158.3 331 43.2
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 3.0e-36 156.8 322 35.4
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 3.9e-36 156.4 336 33.9
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 1.5e-35 154.5 166 49.4
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 1.9e-35 154.1 171 49.1
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 5.6e-35 152.5 146 53.4
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 7.4e-35 152.1 318 36.8
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 7.4e-35 152.1 310 37.1
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 1.3e-34 151.4 374 33.2
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 2.1e-34 150.6 314 36.6
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 2.1e-34 150.6 314 36.6
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 2.1e-34 150.6 327 38.5
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 2.8e-34 150.2 330 34.2
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 3.1e-33 146.7 138 54.3
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 3.1e-33 146.7 138 54.3
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 4.0e-33 146.4 337 33.8
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 2.0e-32 144.1 318 34.0
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.0e-32 144.1 320 34.4
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 7.6e-32 142.1 327 35.5
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.3e-31 141.4 309 30.4
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 1.7e-31 141.0 288 38.2
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 2.2e-31 140.6 173 45.1
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 2.2e-31 140.6 168 47.0
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.9e-31 140.2 356 31.5
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 3.8e-31 139.8 174 46.6
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 6.4e-31 139.0 202 40.6
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 1.1e-30 138.3 337 46.3
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.4e-30 137.1 312 34.6
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.4e-30 137.1 312 34.6
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 5.5e-30 136.0 345 34.5
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 9.3e-30 135.2 136 51.5
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 2.1e-29 134.0 269 35.3
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 3.5e-29 133.3 139 46.0
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.6e-29 132.9 328 32.0
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 4.6e-29 132.9 100 70.0
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 1.3e-26 124.8 303 33.0
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 2.1e-26 124.0 228 38.6
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 6.2e-26 122.5 283 33.6
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 8.1e-26 122.1 154 41.6
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.1e-25 121.7 137 43.8
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 1.4e-25 121.3 334 28.4
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.4e-25 121.3 300 33.0
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 4.0e-25 119.8 321 30.5
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 1.2e-24 118.2 128 45.3
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 7.6e-24 115.5 331 27.8
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 7.6e-24 115.5 247 45.3
CAN.G774.37 Capsicum annuum HOM05D001502 ORTHO05D002950 1.0e-23 115.2 174 55.2
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 8.4e-23 112.1 253 32.8
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 9.3e-22 108.6 314 31.2
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.1e-21 107.5 116 45.7
CAN.G774.36 Capsicum annuum HOM05D004296 ORTHO05D005045 4.3e-19 99.8 79 69.6
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 7.4e-19 99.0 334 29.6
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.6e-19 98.6 85 50.6
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 9.6e-19 98.6 357 28.0
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 1.3e-18 98.2 177 35.0
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 4.8e-18 96.3 159 37.7
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 2.2e-15 87.4 246 41.5
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 1.0e-12 78.6 139 37.4
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 3.0e-12 77.0 127 37.0
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 3.0e-12 77.0 161 34.8
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.1e-11 75.1 79 44.3
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.2e-10 70.9 55 60.0
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 1.4e-09 68.2 109 39.4
arahy.Tifrunner.gnm1.ann1.BHE6V7 Arachis hypogaea HOM05D004296 ORTHO05D005045 2.0e-08 64.3 345 26.4
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 2.6e-08 63.9 104 37.5
AagrBONN_evm.TU.Sc2ySwM_368.2814 Anthoceros agrestis HOM05D004296 ORTHO05D005045 3.4e-08 63.5 122 31.1
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 5.9e-08 62.8 55 45.5
Sabra01G0079000 Salix brachista HOM05D004296 ORTHO05D005045 1.9e-06 57.8 90 41.1


User provided reference genes

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