Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.7e-101 372.9 212 100.0
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.1e-92 343.6 212 92.5
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 1.9e-76 289.7 215 80.0
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 4.2e-76 288.5 215 79.5
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 4.2e-76 288.5 215 79.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.9e-73 279.6 214 76.6
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 7.2e-52 208.0 150 82.7
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 2.7e-51 206.1 220 60.9
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 2.0e-49 199.9 178 67.4
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.5e-49 199.5 217 56.2
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 3.1e-47 192.6 218 53.7
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 3.1e-47 192.6 214 57.0
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 9.1e-47 191.0 207 55.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 2.6e-46 189.5 229 54.6
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 5.0e-45 185.3 215 55.3
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.1e-44 184.1 214 54.7
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.4e-44 183.7 179 62.6
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.9e-44 183.3 192 57.8
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 1.9e-44 183.3 206 52.4
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 5.5e-44 181.8 194 53.1
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 5.5e-44 181.8 216 54.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 2.1e-43 179.9 214 54.7
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.7e-43 179.5 215 53.0
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.7e-43 179.5 218 51.8
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 6.1e-43 178.3 216 55.6
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.1e-43 178.3 189 52.9
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 1.0e-42 177.6 212 51.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 1.4e-42 177.2 212 54.2
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 3.0e-42 176.0 181 59.7
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 5.1e-42 175.3 221 54.8
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.1e-41 174.1 219 52.1
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.5e-41 173.7 273 44.7
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 2.0e-41 173.3 214 53.3
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.6e-41 172.9 221 53.8
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 5.7e-41 171.8 217 57.1
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 9.7e-41 171.0 217 54.4
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 9.7e-41 171.0 217 54.4
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.8e-40 168.7 217 53.9
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 4.8e-40 168.7 214 47.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 4.8e-40 168.7 218 47.2
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.4e-39 167.2 218 47.7
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.8e-39 166.8 215 50.7
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 2.4e-39 166.4 193 55.4
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.3e-39 165.2 200 49.5
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 5.3e-39 165.2 218 45.9
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 9.1e-39 164.5 203 52.2
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 9.1e-39 164.5 213 50.7
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.0e-37 161.0 214 49.5
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 3.8e-37 159.1 210 51.9
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.8e-37 159.1 181 50.8
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 5.0e-37 158.7 216 44.4
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 5.0e-37 158.7 170 55.9
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 6.5e-37 158.3 156 59.6
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 2.1e-35 153.3 212 50.5
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.7e-35 152.9 213 48.8
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.7e-35 152.1 149 61.7
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.0e-34 151.0 183 50.8
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 4.0e-34 149.1 210 51.4
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 2.0e-33 146.7 176 54.5
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 3.3e-33 146.0 212 46.2
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.3e-33 146.0 214 50.9
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 5.7e-33 145.2 210 48.1
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 7.5e-33 144.8 190 49.5
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 6.3e-32 141.7 155 54.2
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.4e-31 140.6 173 49.1
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 3.1e-31 139.4 202 50.0
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 3.1e-31 139.4 202 50.0
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 9.1e-31 137.9 149 59.1
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 9.1e-31 137.9 224 43.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.2e-30 137.5 174 47.7
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.6e-30 137.1 213 46.9
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 4.5e-30 135.6 179 47.5
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 7.7e-30 134.8 197 48.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.0e-29 134.4 199 44.2
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.2e-29 133.3 194 51.0
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 6.5e-29 131.7 217 45.2
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.9e-28 130.2 163 47.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.9e-28 130.2 192 49.0
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.9e-28 130.2 192 49.0
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.5e-28 129.8 206 50.0
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 3.2e-28 129.4 218 47.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.2e-27 127.5 182 51.6
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 2.7e-27 126.3 192 50.5
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 3.6e-27 125.9 180 43.3
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 6.1e-27 125.2 192 45.8
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 6.1e-27 125.2 192 45.8
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 2.3e-26 123.2 166 50.6
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.2e-25 120.9 161 52.2
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.5e-25 120.6 103 62.1
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 4.4e-25 119.0 152 44.7
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 5.7e-25 118.6 206 42.7
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 5.7e-25 118.6 158 51.3
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 9.8e-25 117.9 146 46.6
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.9e-21 106.3 97 56.7
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 2.1e-19 100.1 144 50.7
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 4.0e-18 95.9 178 39.3
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 6.8e-18 95.1 149 51.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 4.9e-16 89.0 102 48.0
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 4.9e-16 89.0 102 48.0
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 4.1e-15 85.9 133 42.9
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 7.3e-12 75.1 192 30.2
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 1.2e-11 74.3 215 28.8
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 8.0e-11 71.6 211 30.8
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.0e-10 69.3 149 35.6
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 6.8e-10 68.6 190 35.8
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.5e-09 67.4 174 43.7


User provided reference genes

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