Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.6e-83 312.8 168 100.0
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.3e-69 266.5 148 95.9
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.8e-61 239.6 148 87.2
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 6.7e-61 237.7 150 84.7
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 8.7e-61 237.3 148 86.5
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.2e-55 218.8 144 81.9
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 2.4e-50 202.6 150 74.7
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 9.7e-36 154.1 148 60.8
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.2e-35 152.9 147 59.9
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 8.2e-35 151.0 142 62.0
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 8.2e-35 151.0 136 61.0
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.4e-34 150.2 141 61.0
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 4.1e-34 148.7 142 61.3
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 5.3e-34 148.3 149 58.4
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.2e-33 147.1 140 60.7
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.5e-33 145.6 138 58.7
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 5.0e-32 141.7 145 57.9
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 7.2e-31 137.9 135 59.3
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.2e-30 137.1 139 58.3
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 1.6e-30 136.7 137 52.6
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.6e-30 136.7 137 52.6
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.7e-30 136.0 137 57.7
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 4.7e-30 135.2 136 56.6
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 8.0e-30 134.4 131 58.0
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.0e-29 134.0 140 55.0
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.4e-29 133.7 139 54.0
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-29 133.3 140 52.1
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.0e-29 132.1 140 51.4
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 6.8e-29 131.3 113 61.1
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 4.4e-28 128.6 140 56.4
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.4e-28 128.6 139 52.5
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 5.7e-28 128.3 131 57.3
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 9.8e-28 127.5 146 54.1
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 9.8e-28 127.5 135 54.8
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.3e-27 127.1 135 54.8
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 1.7e-27 126.7 138 51.4
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.8e-27 125.9 139 51.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 2.8e-27 125.9 139 51.1
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 3.7e-27 125.6 132 53.0
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.8e-27 125.2 136 54.4
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 5.4e-26 121.7 140 51.4
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 5.4e-26 121.7 135 52.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.2e-25 120.6 134 53.7
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 1.6e-25 120.2 139 53.2
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 2.0e-25 119.8 137 54.0
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 3.5e-25 119.0 136 52.9
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 3.5e-25 119.0 135 53.3
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 4.5e-25 118.6 137 47.4
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 5.9e-25 118.2 139 50.4
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 7.7e-25 117.9 136 51.5
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.7e-25 117.9 137 48.9
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 1.3e-24 117.1 133 51.1
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 2.9e-24 115.9 133 47.4
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 2.9e-24 115.9 143 49.0
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 3.8e-24 115.5 135 50.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 8.5e-24 114.4 116 56.9
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.5e-24 114.4 137 48.9
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 8.5e-24 114.4 137 48.9
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 2.5e-23 112.8 136 50.7
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.5e-23 112.8 137 48.2
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.2e-23 112.5 128 51.6
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 3.2e-23 112.5 125 52.8
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 5.5e-23 111.7 90 66.7
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 7.2e-23 111.3 137 46.7
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.1e-22 109.8 134 51.5
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 2.1e-22 109.8 135 48.1
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.7e-22 109.4 142 49.3
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.0e-21 107.5 138 48.6
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 5.2e-21 105.1 71 70.4
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.2e-20 104.0 136 47.8
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.0e-20 103.2 136 47.1
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.4e-20 102.4 109 51.4
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 7.5e-20 101.3 138 43.5
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 4.9e-19 98.6 136 47.8
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 6.3e-19 98.2 129 49.6
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 8.3e-19 97.8 134 47.0
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.1e-18 97.4 134 44.8
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.4e-18 96.3 132 43.9
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 3.1e-18 95.9 137 47.4
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.0e-17 93.2 141 44.7
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 4.5e-17 92.0 129 47.3
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.3e-16 89.7 96 50.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.9e-16 89.4 134 45.5
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 2.9e-16 89.4 136 44.9
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 6.6e-16 88.2 137 45.3
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 4.3e-15 85.5 131 45.0
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 5.6e-15 85.1 100 51.0
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 7.3e-15 84.7 97 49.5
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 7.3e-15 84.7 125 47.2
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.1e-14 83.2 136 44.1
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 2.1e-14 83.2 140 39.3
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 4.7e-14 82.0 135 45.2
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 4.7e-14 82.0 132 41.7
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 8.0e-14 81.3 127 41.7
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 8.0e-14 81.3 147 42.2
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 7.5e-12 74.7 134 41.8
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.4e-10 70.5 100 48.0
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 5.4e-10 68.6 107 43.9
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.2e-10 67.8 97 44.3
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 1.2e-09 67.4 50 68.0
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 4.6e-09 65.5 131 35.1
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 1.0e-08 64.3 109 41.3
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.7e-08 63.5 144 33.3
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 3.0e-08 62.8 129 37.2
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 3.9e-08 62.4 56 62.5
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 8.6e-08 61.2 128 36.7
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.9e-07 60.1 126 39.7
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 7.3e-07 58.2 45 57.8
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 1.6e-06 57.0 107 38.3
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 1.6e-06 57.0 107 38.3
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 2.8e-06 56.2 60 51.7
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 8.0e-06 54.7 108 38.0
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 8.0e-06 54.7 135 31.9


User provided reference genes

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