Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011534g0030 Nicotiana tabacum HOM05D011551 ORTHO05D013890 8.7e-87 323.6 158 100.0
Nitab4.5_0000825g0070 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.0e-42 177.2 130 73.1
Nitab4.5_0008195g0010 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.2e-40 170.2 104 83.7
Nitab4.5_0004608g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 2.6e-38 162.5 87 93.1
Nitab4.5_0004694g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 3.7e-37 158.7 89 87.6
Nitab4.5_0001441g0140 Nicotiana tabacum HOM05D011551 ORTHO05D013890 8.6e-34 147.5 92 82.6
Nitab4.5_0008542g0050 Nicotiana tabacum HOM05D011551 ORTHO05D013890 7.3e-33 144.4 103 76.7
Nitab4.5_0010747g0010 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.2e-16 90.5 44 95.5
Nitab4.5_0006608g0020 Nicotiana tabacum HOM05D025921 ORTHO05D013890 4.7e-16 88.6 105 44.8
Nitab4.5_0002773g0070 Nicotiana tabacum HOM05D011551 ORTHO05D013890 4.0e-15 85.5 109 47.7
Nitab4.5_0001707g0140 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.7e-13 80.1 73 58.9
Nitab4.5_0009385g0020 Nicotiana tabacum HOM05D025921 ORTHO05D013890 6.6e-10 68.2 64 54.7
Nitab4.5_0023508g0010 Nicotiana tabacum HOM05D011551 ORTHO05D013890 5.6e-09 65.1 37 89.2
Hma1.2p1_0851F.1_g228210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.5e-09 64.3 72 44.4
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.6e-08 63.5 53 50.9
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-08 62.0 47 55.3
Nitab4.5_0000167g0080 Nicotiana tabacum HOM05D011551 ORTHO05D013890 6.2e-08 61.6 50 70.0
Hma1.2p1_0180F.1_g079730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.4e-07 60.5 53 47.2
Sopen06g019730 Solanum pennellii HOM05D011551 ORTHO05D020269 1.4e-07 60.5 82 35.4
Gorai.008G186400 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.8e-07 60.1 87 33.3
Hma1.2p1_0348F.1_g131940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-07 59.7 68 42.6
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-07 59.7 73 37.0
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.0e-07 58.9 48 50.0
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 8.9e-07 57.8 70 38.6
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 8.9e-07 57.8 70 38.6
QL09p036938 Quercus lobata HOM05D000030 ORTHO05D000009 1.5e-06 57.0 42 61.9
Nitab4.5_0005854g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 2.6e-06 56.2 44 72.7
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 3.4e-06 55.8 82 37.8
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 3.4e-06 55.8 69 37.7
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 3.4e-06 55.8 69 37.7
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 4.4e-06 55.5 69 37.7
Nitab4.5_0002516g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 4.4e-06 55.5 76 39.5
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.8e-06 55.1 78 41.0
Sopen07g023560 Solanum pennellii HOM05D000030 ORTHO05D000031 5.8e-06 55.1 76 44.7
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 7.6e-06 54.7 46 45.7
QL04p087373 Quercus lobata HOM05D000030 ORTHO05D000009 7.6e-06 54.7 42 59.5
QL08p060040 Quercus lobata HOM05D000030 ORTHO05D000009 7.6e-06 54.7 42 59.5
QL09p032347 Quercus lobata HOM05D000030 ORTHO05D000009 7.6e-06 54.7 42 59.5
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 7.6e-06 54.7 93 34.4
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 7.6e-06 54.7 93 34.4
Gorai.005G140200 Gossypium raimondii HOM05D000030 ORTHO05D000009 9.9e-06 54.3 49 44.9
Hma1.2p1_0247F.1_g101920 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.9e-06 54.3 72 34.7


User provided reference genes

Program Settings