Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 5.9e-89 330.9 170 100.0
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.5e-63 246.5 175 76.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 2.4e-58 229.2 182 70.9
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.4e-58 229.2 182 70.9
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 4.3e-55 218.4 180 68.3
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.0e-53 212.2 130 83.1
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 5.6e-47 191.4 157 66.9
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.0e-42 174.5 177 58.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 5.2e-37 158.3 165 56.4
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 1.3e-32 143.7 156 56.4
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.4e-21 107.1 178 41.6
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.4e-21 107.1 178 41.6
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.4e-20 102.4 102 54.9
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 5.8e-20 101.7 152 41.4
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.9e-19 99.4 158 43.7
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.9e-19 98.6 159 45.3
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 6.4e-19 98.2 159 45.3
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 8.4e-19 97.8 160 44.4
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 8.4e-19 97.8 137 46.7
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.1e-18 97.4 155 46.5
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.4e-18 97.1 162 42.6
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.2e-18 95.9 169 42.6
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.2e-18 95.9 169 42.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.2e-18 95.9 155 43.9
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 5.4e-18 95.1 150 46.7
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 7.1e-18 94.7 153 45.8
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 1.2e-17 94.0 155 42.6
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.2e-17 94.0 160 41.9
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.1e-17 93.2 151 43.7
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 2.7e-17 92.8 156 46.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 3.5e-17 92.4 171 42.1
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 3.5e-17 92.4 165 40.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 4.6e-17 92.0 185 36.8
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 4.6e-17 92.0 141 41.1
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 6.0e-17 91.7 156 46.2
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 6.0e-17 91.7 171 41.5
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.3e-16 90.5 161 41.6
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.3e-16 90.5 152 44.1
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.7e-16 90.1 136 41.2
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.3e-16 89.7 142 44.4
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.0e-16 89.4 156 42.3
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 5.1e-16 88.6 150 42.0
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 8.7e-16 87.8 148 45.9
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.1e-15 87.4 161 36.6
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.5e-15 87.0 161 41.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.5e-15 87.0 163 39.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.9e-15 86.7 147 43.5
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.5e-15 86.3 162 42.6
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 2.5e-15 86.3 152 40.8
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 2.5e-15 86.3 172 40.1
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 2.5e-15 86.3 164 37.8
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 3.3e-15 85.9 162 42.0
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 4.3e-15 85.5 170 40.6
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 4.3e-15 85.5 161 39.8
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 5.6e-15 85.1 162 40.7
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 7.3e-15 84.7 171 39.2
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 7.3e-15 84.7 173 41.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.3e-14 84.0 153 42.5
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-14 83.6 149 40.9
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.6e-14 83.6 161 42.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 2.1e-14 83.2 149 40.9
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 2.1e-14 83.2 149 40.9
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.1e-14 83.2 145 40.0
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.8e-14 82.8 149 40.9
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 2.8e-14 82.8 165 37.6
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.8e-14 82.0 151 41.1
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 4.8e-14 82.0 144 39.6
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 8.1e-14 81.3 154 40.3
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.1e-13 80.9 149 40.3
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.4e-13 80.5 188 38.3
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.4e-13 80.5 148 39.9
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.8e-13 80.1 141 41.8
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.8e-13 80.1 149 40.3
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.4e-13 79.7 144 40.3
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.4e-13 79.7 141 46.8
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 4.0e-13 79.0 153 37.9
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 6.9e-13 78.2 147 39.5
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 6.9e-13 78.2 134 46.3
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.2e-12 77.4 144 41.0
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.5e-12 77.0 171 37.4
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.6e-12 76.3 148 38.5
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.6e-12 76.3 148 38.5
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.6e-12 76.3 152 42.8
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.4e-12 75.9 162 38.9
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 4.5e-12 75.5 153 39.9
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 4.5e-12 75.5 153 37.9
Nitab4.5_0000019g0110 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.5e-12 75.5 105 47.6
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 4.5e-12 75.5 172 36.0
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 7.6e-12 74.7 141 39.7
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 7.6e-12 74.7 153 39.9
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.3e-11 73.9 148 37.8
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.3e-11 73.9 148 37.8
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.7e-11 73.6 157 39.5
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.2e-11 73.2 196 32.1
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-11 72.8 171 36.8
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 6.4e-11 71.6 149 37.6
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 8.4e-11 71.2 154 39.0
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.1e-10 70.9 170 36.5
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.9e-10 70.1 148 34.5
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.9e-10 70.1 161 37.9
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 3.2e-10 69.3 144 37.5
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 3.2e-10 69.3 141 36.2
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 5.4e-10 68.6 170 35.3
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 9.3e-10 67.8 138 37.0
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 9.3e-10 67.8 121 38.8
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.2e-09 67.4 174 33.9
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 1.2e-09 67.4 149 38.9
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.2e-09 67.4 124 38.7
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.1e-09 66.6 122 40.2
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.6e-09 65.5 104 42.3
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 1.3e-08 63.9 77 48.1
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.3e-08 63.9 52 57.7
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.5e-07 59.7 148 37.2
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 3.3e-07 59.3 43 65.1
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.3e-06 57.4 141 36.9
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 1.3e-06 57.4 128 35.2
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 1.3e-06 57.4 46 60.9
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.6e-06 57.0 130 32.3
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.1e-06 56.6 148 36.5


User provided reference genes

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