Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 9.7e-167 590.1 306 100.0
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.2e-164 583.2 306 99.0
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.7e-155 552.7 310 91.0
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.9e-155 552.0 307 91.5
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.6e-153 546.2 310 92.6
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.5e-151 539.7 310 88.7
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.8e-147 525.0 304 87.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.1e-130 470.3 304 77.0
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 3.0e-128 462.2 304 78.0
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.3e-123 446.8 304 77.0
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.5e-122 442.6 304 74.0
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.5e-122 442.6 304 74.0
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-121 440.3 305 74.4
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.7e-121 438.3 304 72.0
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.0e-120 437.2 305 72.8
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.4e-120 436.8 320 71.6
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.3e-120 436.0 306 73.9
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.0e-120 435.3 305 71.8
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 6.8e-120 434.5 306 71.6
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 8.9e-120 434.1 303 72.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.2e-119 433.7 304 73.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.5e-119 433.3 305 73.8
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.6e-119 432.6 304 70.1
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 5.8e-119 431.4 306 72.9
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.8e-119 431.4 304 70.4
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 9.8e-119 430.6 304 71.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.7e-118 429.9 304 70.1
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.2e-118 429.5 306 71.2
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.9e-118 429.1 307 73.0
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 4.9e-118 428.3 304 72.0
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 4.9e-118 428.3 304 71.4
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 8.3e-118 427.6 305 70.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.9e-117 426.4 304 69.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.4e-117 426.0 304 71.7
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.4e-117 424.9 306 70.3
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 9.2e-117 424.1 305 71.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 1.2e-116 423.7 304 69.4
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.6e-116 423.3 304 71.4
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.7e-116 422.5 304 71.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 6.0e-116 421.4 304 71.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 7.8e-116 421.0 304 70.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 3.0e-115 419.1 310 69.0
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 3.9e-115 418.7 292 71.9
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.9e-115 418.7 293 72.0
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 5.0e-115 418.3 304 69.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 5.0e-115 418.3 304 71.4
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 1.9e-114 416.4 304 69.1
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 4.3e-114 415.2 304 69.4
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 4.3e-114 415.2 306 69.3
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 7.3e-114 414.5 305 68.9
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 7.3e-114 414.5 293 70.3
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 9.5e-114 414.1 307 70.0
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 9.5e-114 414.1 304 69.1
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.1e-113 412.9 305 68.9
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.3e-112 409.5 304 68.8
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.2e-112 408.3 308 68.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 8.9e-112 407.5 296 69.9
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 8.9e-112 407.5 304 69.4
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.2e-111 407.1 289 69.9
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.2e-111 407.1 304 69.1
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 2.6e-111 406.0 306 68.0
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 4.4e-111 405.2 289 71.3
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 9.8e-111 404.1 307 67.4
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.3e-110 403.7 305 67.5
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-110 403.3 304 68.4
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 2.2e-110 402.9 289 69.2
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 6.4e-110 401.4 304 67.1
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 6.4e-110 401.4 303 68.6
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 7.0e-109 397.9 306 67.0
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 9.2e-109 397.5 308 67.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.6e-108 396.7 307 68.7
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.1e-108 396.4 305 67.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 2.7e-108 396.0 307 66.4
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.7e-108 396.0 306 67.0
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 3.5e-108 395.6 304 65.5
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 4.6e-108 395.2 305 66.9
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 6.0e-108 394.8 380 56.6
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 7.8e-108 394.4 308 66.6
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.3e-107 393.7 303 65.7
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.3e-107 392.9 325 63.7
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.6e-107 391.3 309 67.3
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.6e-107 391.3 309 67.3
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.1e-106 390.6 309 67.0
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.1e-106 390.6 307 66.4
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.5e-106 390.2 291 69.8
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.9e-106 389.8 304 65.8
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.9e-106 389.8 290 68.6
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 4.3e-106 388.7 309 66.7
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.2e-105 387.1 307 68.4
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.8e-105 386.0 304 65.5
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 2.3e-104 382.9 291 69.1
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.3e-104 382.9 304 64.8
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 4.6e-100 368.6 303 63.7
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 7.8e-100 367.9 293 68.3
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.3e-99 367.1 306 64.1
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 5.1e-99 365.2 458 47.2
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 4.7e-97 358.6 285 66.0
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-96 357.5 258 70.5
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.8e-96 354.8 304 62.8
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 3.4e-95 352.4 267 68.5
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 7.8e-92 341.3 270 68.1
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.8e-89 332.8 292 57.5
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 6.2e-89 331.6 292 57.9
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 5.3e-88 328.6 299 60.2
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 9.9e-87 324.3 306 58.5
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 9.3e-85 317.8 195 79.5
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 1.5e-82 310.5 222 69.4
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.5e-82 310.5 271 59.4
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 6.2e-81 305.1 301 53.8
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-80 304.3 215 70.7
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.2e-78 296.6 304 54.3
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 7.1e-77 291.6 304 53.9
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.0e-75 287.7 308 51.0
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 4.3e-74 282.3 285 55.8
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 4.9e-70 268.9 165 80.0
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.2e-68 264.2 285 50.2
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.1e-68 263.5 286 49.7
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 6.7e-67 258.5 283 49.8
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 6.7e-67 258.5 165 77.6
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 8.7e-67 258.1 290 48.6
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.1e-66 257.7 162 77.2
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 1.1e-64 251.1 265 55.1
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.1e-64 251.1 281 49.5
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.9e-58 230.3 286 45.5
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 9.0e-56 221.5 286 45.8
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 3.8e-54 216.1 171 69.0
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.7e-52 209.9 181 61.3
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 4.6e-52 209.1 229 52.0
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-43 181.4 140 65.0
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.7e-42 174.9 122 72.1
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 3.3e-34 149.8 149 56.4
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 4.7e-20 102.8 140 42.1
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.1e-16 91.7 79 59.5
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 9.1e-16 88.6 253 34.8
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.7e-09 67.8 190 34.2


User provided reference genes

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