Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011488g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.4e-132 474.6 225 100.0
Nitab4.5_0008734g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 9.5e-95 350.5 339 57.5
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.5e-87 325.9 342 53.5
Nitab4.5_0007033g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.6e-86 322.0 337 54.0
Nitab4.5_0001463g0090 Nicotiana tabacum HOM05D007636 ORTHO05D003796 5.8e-84 314.7 335 53.1
Nitab4.5_0000016g0520 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.1e-79 300.4 347 51.6
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.2e-78 297.0 311 53.1
Nitab4.5_0000016g0620 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.0e-72 275.8 248 60.1
Nitab4.5_0000016g0600 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.9e-72 275.4 155 83.9
Nitab4.5_0004233g0050 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.6e-56 221.5 125 83.2
Nitab4.5_0008055g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.6e-54 215.7 265 48.7
Nitab4.5_0001463g0100 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.4e-53 213.0 156 70.5
Nitab4.5_0001463g0070 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.6e-52 209.5 316 43.4
Nitab4.5_0006771g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.2e-51 206.5 157 68.2
Nitab4.5_0009572g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.4e-47 191.4 306 40.8
Nitab4.5_0012115g0020 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.8e-46 189.5 145 65.5
Nitab4.5_0008734g0020 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.6e-44 181.4 280 43.6
Nitab4.5_0002723g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.3e-40 170.6 206 51.0
CAN.G358.103 Capsicum annuum HOM05D007636 ORTHO05D003796 6.9e-37 158.3 139 60.4
PGSC0003DMG400031146 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.0e-36 156.8 138 58.0
PGSC0003DMG400025062 Solanum tuberosum HOM05D007636 ORTHO05D003796 1.9e-34 150.2 141 55.3
PGSC0003DMG400031147 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.5e-34 148.7 155 52.9
PGSC0003DMG400025060 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.7e-33 146.4 138 55.1
Sopen04g028210 Solanum pennellii HOM05D007636 ORTHO05D003796 4.6e-33 145.6 190 45.8
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 4.6e-33 145.6 160 51.2
PGSC0003DMG400025061 Solanum tuberosum HOM05D007636 ORTHO05D003796 6.1e-33 145.2 141 56.7
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 7.9e-33 144.8 188 45.7
Solyc01g021730.2 Solanum lycopersicum HOM05D007636 ORTHO05D003796 1.3e-32 144.1 170 48.8
Sopen01g016580 Solanum pennellii HOM05D007636 ORTHO05D003796 1.8e-32 143.7 170 48.8
Peaxi162Scf00688g00041 Petunia axillaris HOM05D007636 ORTHO05D003796 8.7e-32 141.4 159 51.6
Peaxi162Scf00688g00314 Petunia axillaris HOM05D007636 ORTHO05D003796 8.7e-32 141.4 159 51.6
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 1.1e-31 141.0 160 50.6
Peaxi162Scf00811g00013 Petunia axillaris HOM05D007636 ORTHO05D003796 4.3e-31 139.0 142 54.2
Peaxi162Scf00811g00023 Petunia axillaris HOM05D007636 ORTHO05D003796 4.3e-31 139.0 142 54.2
Peaxi162Scf02167g00001 Petunia axillaris HOM05D007636 ORTHO05D003796 4.3e-31 139.0 142 54.2
Peaxi162Scf68101g00002 Petunia axillaris HOM05D007636 ORTHO05D003796 7.4e-31 138.3 159 50.9
Nitab4.5_0000016g0480 Nicotiana tabacum HOM05D007636 ORTHO05D003796 5.3e-29 132.1 246 38.2
CAN.G895.29 Capsicum annuum HOM05D007636 ORTHO05D003796 4.5e-28 129.0 155 49.0
Nitab4.5_0005616g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.5e-26 123.2 62 87.1
CAN.G895.31 Capsicum annuum HOM05D007636 ORTHO05D003796 4.6e-25 119.0 140 51.4
Sopen11g011520 Solanum pennellii HOM05D007636 ORTHO05D003796 6.7e-24 115.2 141 45.4
CAN.G1453.5 Capsicum annuum HOM05D007636 ORTHO05D003796 1.1e-23 114.4 140 50.7
Nitab4.5_0000016g0410 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.5e-23 113.2 156 45.5
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 5.9e-20 102.1 165 43.0
Sopen11g011600 Solanum pennellii HOM05D007636 ORTHO05D003796 3.8e-19 99.4 156 42.9
CAN.G1574.1 Capsicum annuum HOM05D007636 ORTHO05D003796 6.5e-19 98.6 149 44.3
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 1.9e-18 97.1 174 42.0
Nitab4.5_0003273g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.2e-18 96.3 57 82.5
Peaxi162Scf00269g00151 Petunia axillaris HOM05D007636 ORTHO05D003796 4.2e-18 95.9 162 41.4
Nitab4.5_0012611g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.2e-18 95.1 119 51.3
Solyc11g022480.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 1.2e-17 94.4 122 43.4
Solyc06g063380.1 Solanum lycopersicum HOM05D007636 ORTHO05D017739 1.4e-16 90.9 158 41.8
Sopen06g022850 Solanum pennellii HOM05D007636 ORTHO05D017739 2.3e-16 90.1 158 41.8
CAN.G1453.2 Capsicum annuum HOM05D007636 ORTHO05D003796 1.1e-15 87.8 146 42.5
CAN.G1574.3 Capsicum annuum HOM05D007636 ORTHO05D003796 3.3e-15 86.3 140 39.3
Solyc08g028850.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 9.7e-15 84.7 75 54.7
Nitab4.5_0002979g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.3e-14 84.3 103 52.4
Nitab4.5_0010495g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.8e-14 82.4 207 32.9
Nitab4.5_0003273g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.1e-13 79.7 136 41.9
PGSC0003DMG400043518 Solanum tuberosum HOM05D007636 ORTHO05D003796 3.1e-13 79.7 106 42.5
Nitab4.5_0001463g0110 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.6e-12 76.6 32 93.8
CAN.G672.9 Capsicum annuum HOM05D007636 ORTHO05D003796 1.3e-11 74.3 93 49.5
SGA_v2.0_scaffold15G07271 Striga asiatica HOM05D007636 ORTHO05D003796 5.0e-11 72.4 141 35.5
SGA_v2.0_scaffold40G15410 Striga asiatica HOM05D007636 ORTHO05D003796 5.0e-11 72.4 237 27.0
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 8.5e-11 71.6 180 30.6
SGA_v2.0_scaffold135G34844 Striga asiatica HOM05D007636 ORTHO05D003796 1.1e-10 71.2 149 34.2
CAN.G1453.7 Capsicum annuum HOM05D007636 ORTHO05D003796 1.5e-10 70.9 74 54.1
SGA_v2.0_scaffold1G00731 Striga asiatica HOM05D007636 ORTHO05D003796 1.5e-10 70.9 139 33.1
SGA_v2.0_scaffold135G34846 Striga asiatica HOM05D007636 ORTHO05D003796 4.2e-10 69.3 149 33.6
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 4.2e-10 69.3 133 36.1
Thecc.10G132400 Theobroma cacao HOM05D002630 ORTHO05D000952 7.2e-10 68.6 133 36.8
PGSC0003DMG400035123 Solanum tuberosum HOM05D007636 ORTHO05D003796 9.4e-10 68.2 137 32.1
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.2e-09 67.8 147 32.7
Lj5P158T23 Lonicera japonica HOM05D014435 ORTHO05D000952 2.1e-09 67.0 134 36.6
COL.COLO4_33115 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.0e-08 64.7 149 32.9
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.0e-08 63.2 154 33.8
Thecc.10G134900 Theobroma cacao HOM05D002630 ORTHO05D000952 3.0e-08 63.2 131 34.4
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.0e-08 62.8 139 32.4
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 5.2e-08 62.4 139 32.4
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 5.2e-08 62.4 139 32.4
FAN01G3145 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.7e-08 62.0 139 34.5
Atru.chr1.1696 Acer truncatum HOM05D002630 ORTHO05D000952 8.8e-08 61.6 138 34.1
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 2.0e-07 60.5 159 32.1
CAN.G895.32 Capsicum annuum HOM05D007636 ORTHO05D003796 2.6e-07 60.1 43 72.1
FvH4_7g11470 Fragaria vesca HOM05D002630 ORTHO05D000952 3.3e-07 59.7 167 30.5
CAN.G895.26 Capsicum annuum HOM05D007636 ORTHO05D003796 4.4e-07 59.3 78 46.2
Atru.chr1.1517 Acer truncatum HOM05D002630 ORTHO05D000952 5.7e-07 58.9 133 34.6
FAN06G2160 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.7e-07 58.9 167 30.5
FAN06G5033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.7e-07 58.9 167 30.5
TWI75G0791 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 5.7e-07 58.9 136 32.4
FAN03G2513 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.5e-07 58.5 148 31.1
Solyc07g053680.2 Solanum lycopersicum HOM05D009491 ORTHO05D003796 1.3e-06 57.8 144 29.9
Atru.chr1.1697 Acer truncatum HOM05D002630 ORTHO05D000952 1.7e-06 57.4 133 33.8
MD15G1393000 Malus domestica HOM05D002630 ORTHO05D000952 1.7e-06 57.4 145 27.6
FAN08G3500 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-06 57.0 135 34.1
MD11G1075600 Malus domestica HOM05D002630 ORTHO05D000952 2.2e-06 57.0 147 25.9
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.2e-06 57.0 150 30.7
FAN04G1225 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.8e-06 56.6 135 32.6
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 2.8e-06 56.6 215 32.6
SGA_v2.0_scaffold1G00666 Striga asiatica HOM05D007636 ORTHO05D003796 2.8e-06 56.6 134 27.6
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.7e-06 56.2 158 31.0
FvH4_5g25360 Fragaria vesca HOM05D002630 ORTHO05D000952 8.2e-06 55.1 130 33.8
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 55.1 146 28.8


User provided reference genes

Program Settings