Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011440g0020 Nicotiana tabacum HOM05D007899 ORTHO05D015563 6.5e-57 223.8 109 100.0
Nitab4.5_0000507g0100 Nicotiana tabacum HOM05D007899 ORTHO05D015563 6.1e-47 190.7 100 91.0
Peaxi162Scf01343g00160 Petunia axillaris HOM05D007899 ORTHO05D015563 6.7e-38 160.6 101 77.2
PGSC0003DMG400046176 Solanum tuberosum HOM05D007899 ORTHO05D015563 9.1e-35 150.2 97 73.2
Solyc08g044330.2 Solanum lycopersicum HOM05D007899 ORTHO05D015563 3.5e-34 148.3 97 74.2
Peaxi162Scf01343g00111 Petunia axillaris HOM05D007899 ORTHO05D015563 2.9e-33 145.2 105 71.4
Peaxi162Scf00231g00011 Petunia axillaris HOM05D007899 ORTHO05D015563 1.0e-25 120.2 98 65.3
Nitab4.5_0002646g0050 Nicotiana tabacum HOM05D007899 ORTHO05D015563 3.5e-18 95.1 84 60.7
Nitab4.5_0006446g0030 Nicotiana tabacum HOM05D007899 ORTHO05D015563 1.6e-15 86.3 61 70.5
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-14 80.9 49 81.6
CAN.G636.3 Capsicum annuum HOM05D007899 ORTHO05D015563 5.8e-13 77.8 102 47.1
TAR362G0732 Trochodendron aralioides HOM05D007899 ORTHO05D010282 5.4e-11 71.2 100 36.0
Hma1.2p1_0542F.1_g175100 Hydrangea macrophylla HOM05D007899 ORTHO05D010282 9.2e-11 70.5 95 41.1
Hma1.2p1_1765F.1_g301420 Hydrangea macrophylla HOM05D007899 ORTHO05D010282 1.6e-10 69.7 95 41.1
TPR.G1588 Trifolium pratense HOM05D000886 ORTHO05D000525 2.3e-09 65.9 102 37.3
QL04p029020 Quercus lobata HOM05D007899 ORTHO05D010282 1.1e-08 63.5 101 35.6
Nn7g36495 Nelumbo nucifera HOM05D000886 ORTHO05D000525 2.5e-08 62.4 95 41.1
Sabra06G0021000 Salix brachista HOM05D000886 ORTHO05D000525 2.5e-08 62.4 95 40.0
QL04p028890 Quercus lobata HOM05D000007 ORTHO05D000521 3.3e-08 62.0 101 34.7
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 7.3e-08 60.8 94 38.3
Nitab4.5_0007328g0020 Nicotiana tabacum HOM05D007899 ORTHO05D015563 7.3e-08 60.8 47 72.3
Potri.016G028700 Populus trichocarpa HOM05D000886 ORTHO05D000525 1.2e-07 60.1 96 40.6
MELO3C009746.2 Cucumis melo HOM05D000886 ORTHO05D000525 1.6e-07 59.7 91 36.3
CsaV3_3G040060 Cucumis sativus L. HOM05D000886 ORTHO05D000525 1.6e-07 59.7 91 36.3
arahy.Tifrunner.gnm1.ann1.RIPR8S Arachis hypogaea HOM05D007899 ORTHO05D010282 2.1e-07 59.3 104 37.5
CANSAT64G2259 Cannabis sativa HOM05D007899 ORTHO05D010282 2.8e-07 58.9 107 31.8
Nitab4.5_0000642g0270 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.8e-07 58.9 91 37.4
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 4.7e-07 58.2 101 35.6
Gohir.A12G121800 Gossypium hirsutum HOM05D007899 ORTHO05D010282 4.7e-07 58.2 100 36.0
Gohir.D12G125400 Gossypium hirsutum HOM05D007899 ORTHO05D010282 4.7e-07 58.2 100 36.0
Gorai.008G136400 Gossypium raimondii HOM05D007899 ORTHO05D010282 4.7e-07 58.2 100 36.0
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 4.7e-07 58.2 91 34.1
Aqoxy2G02686 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 6.2e-07 57.8 105 32.4
Manes.08G161704 Manihot esculenta HOM05D000886 ORTHO05D000525 6.2e-07 57.8 87 40.2
CANSAT64G2470 Cannabis sativa HOM05D007899 ORTHO05D010282 8.0e-07 57.4 108 28.7
QL09p046424 Quercus lobata HOM05D007899 ORTHO05D010282 8.0e-07 57.4 101 34.7
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 1.8e-06 56.2 92 37.0
Lalb_Chr03g0042881 Lupinus albus HOM05D000886 ORTHO05D000525 1.8e-06 56.2 108 33.3
ClCG10G016290 Citrullus lanatus HOM05D000886 ORTHO05D000525 2.3e-06 55.8 91 33.0
Lj1P1081T21 Lonicera japonica HOM05D000886 ORTHO05D000525 2.3e-06 55.8 91 36.3
Lalb_Chr07g0184251 Lupinus albus HOM05D007899 ORTHO05D010282 2.3e-06 55.8 100 33.0
AUR62021032 Chenopodium quinoa HOM05D000886 ORTHO05D000525 4.0e-06 55.1 102 32.4
Nitab4.5_0000296g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.0e-06 55.1 91 34.1
Peaxi162Scf00016g00923 Petunia axillaris HOM05D000886 ORTHO05D000525 4.0e-06 55.1 96 35.4
Peaxi162Scf00919g00048 Petunia axillaris HOM05D007899 ORTHO05D010282 4.0e-06 55.1 110 34.5
TPR.G1581 Trifolium pratense HOM05D000886 ORTHO05D000525 4.0e-06 55.1 95 33.7
Ca_09164_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 6.8e-06 54.3 100 32.0
Psat3g135440 Pisum sativum HOM05D000886 ORTHO05D000525 6.8e-06 54.3 94 33.0
Psat3g135480 Pisum sativum HOM05D000886 ORTHO05D000525 6.8e-06 54.3 97 38.1
Thecc.01G321600 Theobroma cacao HOM05D007899 ORTHO05D010282 6.8e-06 54.3 103 34.0
Atru.chr1.1368 Acer truncatum HOM05D000886 ORTHO05D000525 8.9e-06 53.9 91 36.3
Nitab4.5_0004218g0020 Nicotiana tabacum HOM05D007899 ORTHO05D010282 8.9e-06 53.9 111 31.5


User provided reference genes

Program Settings