Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011372g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 1.1e-50 203.0 98 100.0
Nitab4.5_0000375g0220 Nicotiana tabacum HOM05D007120 ORTHO05D008881 3.6e-30 134.8 98 72.4
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 3.6e-14 81.6 94 50.0
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 2.3e-13 79.0 94 48.9
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 4.0e-13 78.2 98 46.9
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 3.4e-12 75.1 94 47.9
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 3.4e-12 75.1 94 47.9
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 4.4e-12 74.7 93 45.2
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 2.2e-11 72.4 93 41.9
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.8e-11 72.0 92 42.4
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 2.8e-11 72.0 94 44.7
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 3.7e-11 71.6 92 42.4
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 4.8e-11 71.2 96 42.7
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 6.3e-11 70.9 92 43.5
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 6.3e-11 70.9 97 39.2
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 6.3e-11 70.9 93 43.0
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 1.8e-10 69.3 91 44.0
Nitab4.5_0012297g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 1.8e-10 69.3 36 88.9
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 4.1e-10 68.2 95 44.2
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 4.1e-10 68.2 91 40.7
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 7.0e-10 67.4 91 39.6
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 7.0e-10 67.4 91 40.7
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 1.6e-09 66.2 96 37.5
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 2.7e-09 65.5 93 40.9
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 2.7e-09 65.5 94 40.4
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 2.7e-09 65.5 94 40.4
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 2.7e-09 65.5 94 40.4
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 3.5e-09 65.1 95 40.0
FAN01G0895 Fragaria x ananassa HOM05D007120 ORTHO05D008881 3.5e-09 65.1 95 45.3
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 4.5e-09 64.7 91 39.6
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 4.5e-09 64.7 96 37.5
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 1.0e-08 63.5 98 38.8
Sopen07g008940 Solanum pennellii HOM05D007120 ORTHO05D008881 1.0e-08 63.5 35 82.9
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 1.3e-08 63.2 95 37.9
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 1.7e-08 62.8 94 39.4
FvH4_7g26050 Fragaria vesca HOM05D007120 ORTHO05D008881 2.2e-08 62.4 95 41.1
FAN10G2835 Fragaria x ananassa HOM05D007120 ORTHO05D008881 2.2e-08 62.4 95 41.1
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 2.2e-08 62.4 92 38.0
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.9e-08 62.0 91 39.6
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 2.9e-08 62.0 91 39.6
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 2.9e-08 62.0 95 37.9
Peaxi162Scf00184g00003 Petunia axillaris HOM05D007120 ORTHO05D008881 2.9e-08 62.0 40 72.5
TAR633G1173 Trochodendron aralioides HOM05D009315 ORTHO05D008839 2.9e-08 62.0 53 62.3
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 3.8e-08 61.6 89 40.4
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 3.8e-08 61.6 94 38.3
Sc11g0006040 Simmondsia chinensis HOM05D007120 ORTHO05D008881 3.8e-08 61.6 37 73.0
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 5.0e-08 61.2 93 38.7
FAN03G2745 Fragaria x ananassa HOM05D007120 ORTHO05D008881 6.5e-08 60.8 93 39.8
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 6.5e-08 60.8 91 38.5
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 1.1e-07 60.1 97 39.2
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 1.5e-07 59.7 91 39.6
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 1.5e-07 59.7 92 39.1
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 1.9e-07 59.3 90 36.7
CiPaw.13G063000 Carya illinoinensis HOM05D007120 ORTHO05D008881 2.5e-07 58.9 40 67.5
COL.COLO4_19468 Corchorus olitorius HOM05D007120 ORTHO05D008881 2.5e-07 58.9 35 77.1
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 4.2e-07 58.2 91 35.2
MELO3C020013.2 Cucumis melo HOM05D007120 ORTHO05D008881 1.2e-06 56.6 37 73.0
CsaV3_6G002350 Cucumis sativus L. HOM05D007120 ORTHO05D008881 1.2e-06 56.6 37 73.0
ClCG11G005640 Citrullus lanatus HOM05D007120 ORTHO05D008881 1.6e-06 56.2 35 77.1
Dinv34497 Davidia involucrata HOM05D006907 ORTHO05D008598 1.6e-06 56.2 87 39.1
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 2.1e-06 55.8 94 37.2
HPP92_000774 Vanilla planifolia HOM05D007120 ORTHO05D008881 2.1e-06 55.8 38 65.8
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 3.6e-06 55.1 96 35.4
ATR1127G135 Amborella trichopoda HOM05D007120 ORTHO05D008881 4.7e-06 54.7 37 62.2
QL09p041996 Quercus lobata HOM05D031581 ORTHO05D008881 4.7e-06 54.7 41 68.3
HPP92_026799 Vanilla planifolia HOM05D007120 ORTHO05D008881 4.7e-06 54.7 36 66.7
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 6.1e-06 54.3 41 65.9
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 8.0e-06 53.9 96 36.5
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 8.0e-06 53.9 96 36.5


User provided reference genes

Program Settings