Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 0.0e+00 1172.9 569 100.0
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.9e-310 1067.4 595 88.1
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 5.3e-243 844.3 580 74.3
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.4e-235 818.9 582 72.0
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 4.2e-232 808.1 582 71.5
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 5.9e-226 787.7 581 69.5
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.2e-212 742.7 565 67.8
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 2.4e-158 563.1 578 50.5
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 9.9e-157 557.8 580 49.8
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 8.4e-148 528.1 554 50.7
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.4e-147 526.6 565 47.8
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.6e-146 523.9 571 47.8
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.5e-144 517.3 579 46.1
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.6e-143 513.8 571 47.8
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.8e-135 485.7 608 46.4
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 5.3e-134 482.3 573 46.8
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.2e-131 472.6 591 43.3
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.8e-129 467.2 592 45.1
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 1.8e-129 467.2 568 44.5
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 5.1e-129 465.7 589 45.0
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.1e-126 458.0 577 44.7
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 2.4e-126 456.8 574 45.1
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 9.0e-126 454.9 576 42.9
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 4.5e-125 452.6 584 45.4
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 5.9e-125 452.2 580 44.5
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.7e-124 450.7 573 43.6
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.7e-124 450.7 578 44.1
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.5e-123 446.8 573 43.5
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 3.6e-122 443.0 570 43.7
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 3.0e-121 439.9 585 43.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.5e-120 437.6 605 40.5
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.9e-120 437.2 584 43.7
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 1.9e-120 437.2 584 41.8
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.3e-120 436.0 570 41.4
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.7e-120 435.6 572 41.6
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 3.7e-119 433.0 568 40.8
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 6.3e-119 432.2 574 42.0
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 8.2e-119 431.8 576 41.5
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-118 431.4 567 41.4
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 2.6e-117 426.8 576 43.8
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 7.7e-117 425.2 570 40.5
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.0e-116 424.9 580 40.0
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.7e-116 424.1 574 41.6
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.7e-116 424.1 568 40.5
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 2.2e-116 423.7 572 43.2
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 1.9e-115 420.6 588 41.3
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 5.5e-115 419.1 584 41.4
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 9.4e-115 418.3 588 41.3
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 4.7e-114 416.0 587 42.6
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 2.3e-113 413.7 575 41.0
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 4.4e-112 409.5 585 40.0
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 4.4e-112 409.5 578 39.8
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 5.7e-112 409.1 585 40.0
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 9.7e-112 408.3 576 40.8
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 2.8e-111 406.8 579 40.2
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.8e-111 406.0 575 40.3
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.1e-110 404.8 572 40.9
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.4e-110 404.4 520 43.7
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.8e-110 404.1 578 40.0
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 3.1e-110 403.3 509 43.6
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 1.2e-109 401.4 580 39.1
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 1.5e-109 401.0 439 47.6
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.5e-109 401.0 586 41.1
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 4.5e-109 399.4 577 39.0
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 7.7e-109 398.7 576 41.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.0e-108 398.3 611 39.0
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 8.5e-108 395.2 604 38.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 8.5e-108 395.2 578 39.8
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.5e-107 393.7 602 39.0
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 5.5e-107 392.5 577 38.6
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.8e-105 387.5 575 38.8
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.1e-104 384.8 578 39.6
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 7.0e-102 375.6 568 38.6
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 2.0e-101 374.0 580 39.5
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 3.8e-100 369.8 577 37.1
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 3.8e-100 369.8 582 38.1
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 2.7e-98 363.6 565 38.4
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 2.0e-96 357.5 576 37.3
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 2.8e-95 353.6 570 37.2
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 2.8e-95 353.6 575 36.3
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 8.2e-95 352.1 562 37.5
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 8.2e-95 352.1 570 37.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 8.2e-95 352.1 562 37.5
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.1e-94 351.7 573 36.1
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.8e-94 350.9 574 36.8
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.0e-93 347.4 569 36.7
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 5.5e-91 339.3 408 44.4
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 2.2e-87 327.4 588 34.7
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 4.8e-87 326.2 563 36.2
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.5e-83 314.7 592 34.6
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.8e-81 307.8 429 40.3
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 5.7e-80 302.8 540 37.4
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 9.2e-78 295.4 445 39.1
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.1e-75 288.5 412 39.8
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.5e-75 288.1 417 39.6
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 2.3e-73 280.8 364 42.3
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.2e-72 278.5 440 38.2
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.9e-67 261.2 422 36.7
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 4.7e-58 229.9 219 52.5
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 2.5e-51 207.6 628 25.8
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.6e-50 204.9 611 27.5
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 8.4e-47 192.6 239 41.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.7e-44 184.9 507 28.4
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 6.6e-44 183.0 186 50.0
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 4.3e-35 153.7 578 25.6
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 7.6e-32 142.9 134 54.5
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.4e-30 136.7 137 52.6
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.0e-28 131.0 127 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.9e-27 128.3 477 23.7
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.1e-25 122.5 351 27.6
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 9.9e-24 115.9 261 32.6
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.8e-23 114.0 146 45.2
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 3.0e-20 104.4 150 43.3
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 4.0e-17 94.0 124 40.3
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 5.3e-09 67.0 83 41.0
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 5.9e-08 63.5 80 45.0
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.7e-07 62.0 75 45.3
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 5.0e-07 60.5 113 29.2


User provided reference genes

Program Settings