Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.8e-154 548.5 268 100.0
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 8.3e-130 467.2 265 87.2
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.8e-124 449.5 270 83.0
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 4.0e-124 448.4 270 83.0
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 4.1e-121 438.3 264 83.0
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 9.2e-121 437.2 257 83.7
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 3.9e-111 405.2 264 76.9
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.9e-105 386.3 271 70.8
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 2.4e-105 386.0 264 71.6
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 3.2e-105 385.6 270 72.2
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 9.2e-105 384.0 279 69.2
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.5e-102 376.7 268 69.8
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 2.8e-101 372.5 264 69.3
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.6e-101 372.1 270 69.3
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.1e-100 370.5 268 67.9
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.4e-100 370.2 270 67.4
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 4.0e-100 368.6 277 67.1
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 8.9e-100 367.5 277 65.0
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.2e-99 367.1 260 69.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.5e-99 366.7 267 69.7
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.4e-99 365.5 255 71.8
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.2e-98 362.8 270 67.0
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.2e-98 362.8 270 67.0
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.1e-97 360.5 267 65.9
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.1e-97 360.5 267 68.2
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.1e-97 360.5 267 69.3
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 4.6e-96 355.1 261 66.7
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 3.0e-95 352.4 264 67.0
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 5.1e-95 351.7 268 65.3
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 5.1e-95 351.7 269 63.9
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 3.3e-94 349.0 264 65.5
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 9.6e-94 347.4 267 64.0
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 1.2e-93 347.1 269 65.1
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 4.7e-93 345.1 267 64.8
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.4e-92 343.6 276 62.0
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.4e-92 343.6 262 64.9
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.8e-92 343.2 258 65.5
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.8e-92 343.2 260 66.2
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.4e-92 342.8 266 63.2
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 3.1e-92 342.4 264 64.0
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 3.1e-92 342.4 264 64.0
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 4.0e-92 342.0 258 65.5
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 6.9e-92 341.3 257 65.0
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 3.4e-91 339.0 266 62.4
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 9.9e-91 337.4 254 63.4
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.3e-90 337.0 248 65.7
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.3e-90 337.0 263 66.2
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 2.2e-90 336.3 266 63.2
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 2.9e-90 335.9 266 62.8
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 1.1e-89 334.0 265 63.0
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.4e-89 333.6 263 65.4
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.4e-89 333.6 260 65.4
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.4e-89 332.8 263 65.0
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 3.2e-89 332.4 279 62.0
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 3.2e-89 332.4 254 62.6
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 4.2e-89 332.0 271 60.9
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 4.2e-89 332.0 249 66.3
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.4e-89 331.6 263 64.6
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.4e-89 331.6 270 63.7
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 5.4e-89 331.6 257 62.6
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.2e-88 330.5 265 62.6
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 1.6e-88 330.1 263 64.3
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.6e-88 330.1 261 62.1
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.6e-88 330.1 271 63.1
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 2.1e-88 329.7 271 63.1
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 2.7e-88 329.3 263 62.7
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 2.7e-88 329.3 263 62.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 2.7e-88 329.3 262 63.0
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 7.8e-88 327.8 267 63.3
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.3e-87 327.0 264 61.7
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.3e-87 327.0 262 61.1
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 1.7e-87 326.6 263 62.4
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.7e-87 326.6 260 64.6
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 2.3e-87 326.2 269 62.8
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 3.0e-87 325.9 263 62.4
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-87 325.9 248 65.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 3.0e-87 325.9 268 60.1
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.9e-87 325.5 269 62.8
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 6.6e-87 324.7 273 60.4
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.1e-86 323.9 271 61.6
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.5e-86 322.8 255 61.6
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 3.3e-86 322.4 264 62.1
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 7.3e-86 321.2 264 60.2
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 7.3e-86 321.2 258 60.5
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 9.6e-86 320.9 264 61.4
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.6e-85 320.1 274 59.9
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.1e-84 317.4 262 59.9
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.4e-84 317.0 264 59.1
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.8e-84 316.6 254 61.4
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 4.0e-84 315.5 264 58.7
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.6e-83 312.8 264 59.1
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 8.4e-82 307.8 269 58.0
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 5.4e-81 305.1 262 60.3
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 5.1e-79 298.5 262 58.0
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.6e-77 293.5 231 66.7
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.6e-77 293.5 167 85.0
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.1e-76 289.3 266 54.1
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.7e-74 283.5 285 50.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.0e-71 272.7 260 54.6
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 1.9e-70 270.0 255 56.1
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 9.6e-70 267.7 262 56.1
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.3e-69 267.3 280 49.3
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.2e-69 265.0 161 78.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.8e-68 263.5 160 78.1
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 6.9e-68 261.5 262 53.4
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 6.9e-68 261.5 162 77.8
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.0e-67 260.0 248 56.0
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.0e-67 260.0 249 55.0
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.1e-60 237.7 162 68.5
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 4.1e-60 235.7 677 29.5
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 4.1e-60 235.7 259 48.6
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 2.9e-58 229.6 198 58.6
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.3e-55 219.9 140 73.6
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 3.3e-54 216.1 248 46.4
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.4e-47 194.1 263 43.3
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.6e-46 189.9 168 58.3
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.8e-45 186.4 237 43.0
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.1e-41 174.5 159 60.4
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 6.1e-40 168.7 97 78.4
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.1e-38 164.5 154 57.8
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 3.7e-37 159.5 209 44.5
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.3e-36 155.6 161 55.9
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.9e-35 152.1 161 55.3
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 7.7e-27 125.2 167 44.9
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.1e-25 121.3 111 57.7
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.5e-25 120.9 89 68.5
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.2e-24 117.9 89 64.0
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.2e-24 117.9 89 64.0
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.1e-24 115.5 85 68.2
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.2e-23 112.5 150 44.7
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 7.5e-22 108.6 97 52.6
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 4.8e-21 105.9 92 58.7
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 6.3e-21 105.5 126 50.8
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.5e-17 92.4 260 29.6
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 4.5e-11 72.8 245 28.2
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.3e-09 66.2 76 47.4
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.3e-09 66.2 76 47.4
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 7.3e-09 65.5 76 47.4


User provided reference genes

Program Settings