Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.0e-178 629.0 322 100.0
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.8e-147 526.2 308 88.6
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 3.1e-147 525.4 308 88.0
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.5e-146 523.1 320 85.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.7e-142 509.6 301 86.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 5.1e-142 508.1 280 92.5
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.8e-132 475.7 299 82.9
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.1e-125 453.8 318 74.2
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.1e-123 447.2 317 71.6
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.7e-121 439.9 315 72.1
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.5e-121 438.0 326 69.6
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.2e-120 435.3 317 70.3
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 4.2e-120 435.3 317 71.3
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.6e-119 433.3 319 69.9
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.7e-119 432.6 326 69.3
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.7e-119 432.6 326 69.3
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.7e-119 432.6 314 72.0
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.6e-119 431.8 317 69.7
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 6.1e-119 431.4 315 71.4
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 7.9e-119 431.0 326 68.7
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 3.0e-118 429.1 321 68.5
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 6.7e-118 427.9 309 72.8
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.1e-117 427.2 314 70.4
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.5e-117 426.0 326 69.0
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.5e-117 426.0 308 72.4
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 5.7e-117 424.9 320 69.7
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.2e-116 422.9 318 69.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.1e-115 420.6 309 72.5
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.4e-115 420.2 307 71.0
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.1e-115 419.1 311 71.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.0e-113 414.1 305 70.2
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.0e-113 414.1 308 68.5
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.3e-113 413.7 308 70.5
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.7e-113 413.3 308 68.8
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.1e-112 410.6 319 66.8
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 4.2e-112 408.7 320 68.8
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 4.2e-112 408.7 307 70.4
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 5.5e-112 408.3 327 65.4
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 5.5e-112 408.3 307 69.7
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 5.5e-112 408.3 306 69.3
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.2e-111 407.1 308 68.2
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 2.7e-111 406.0 308 68.2
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 3.6e-111 405.6 308 67.5
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 4.6e-111 405.2 310 67.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.0e-110 404.1 307 70.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.0e-110 404.1 305 67.9
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 3.0e-110 402.5 328 66.5
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 3.0e-110 402.5 313 69.0
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 5.1e-110 401.7 307 69.7
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.5e-109 400.2 392 58.2
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 2.0e-109 399.8 325 65.8
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 4.3e-109 398.7 308 67.2
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 4.3e-109 398.7 307 69.4
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 5.7e-109 398.3 308 66.9
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 9.7e-109 397.5 309 66.7
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 9.7e-109 397.5 308 68.8
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 1.3e-108 397.1 324 67.0
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.7e-108 396.7 316 67.4
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 2.2e-108 396.4 309 66.3
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.2e-108 396.4 329 66.0
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 3.7e-108 395.6 307 68.1
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 4.8e-108 395.2 307 67.1
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 6.3e-108 394.8 320 65.9
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.1e-107 394.0 309 66.3
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.4e-107 392.9 315 67.3
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 3.1e-107 392.5 309 66.3
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 3.1e-107 392.5 321 65.4
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 4.1e-107 392.1 317 65.3
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 5.3e-107 391.7 310 67.7
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 6.9e-107 391.3 309 66.3
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 9.1e-107 391.0 310 67.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.2e-106 390.6 327 65.1
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 2.0e-106 389.8 293 69.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.3e-105 387.1 316 65.2
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 1.3e-105 387.1 307 66.8
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 6.5e-105 384.8 323 64.4
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.6e-103 380.2 321 64.5
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.7e-103 379.4 259 73.4
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 2.4e-99 366.3 305 64.9
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.6e-98 363.6 315 62.9
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 3.8e-97 359.0 313 63.3
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.7e-95 352.8 259 68.3
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 4.7e-95 352.1 320 60.9
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 1.0e-94 350.9 320 60.6
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 7.5e-93 344.7 320 59.7
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 9.7e-93 344.4 325 59.4
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.3e-89 334.0 351 53.3
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.9e-88 330.1 314 58.3
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 5.5e-88 328.6 319 56.7
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 2.4e-83 313.2 319 56.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 9.1e-83 311.2 339 55.8
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.0e-81 307.8 236 67.4
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.7e-79 299.7 320 53.1
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 8.3e-76 288.1 307 52.4
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.5e-72 276.6 307 51.5
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 7.8e-66 255.0 184 71.7
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.9e-60 236.5 274 49.6
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 2.2e-52 210.3 257 49.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 2.0e-45 187.2 323 37.2
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.6e-45 186.8 195 55.4
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.3e-44 184.5 302 39.7
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 8.4e-44 181.8 205 51.2
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.1e-39 167.2 104 76.9
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.2e-38 162.5 123 61.8
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.5e-29 134.4 143 51.7
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.1e-23 114.0 79 68.4
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.4e-14 84.7 233 30.9
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.1e-11 75.1 49 63.3
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 9.3e-11 72.0 83 54.2
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.6e-10 71.2 51 62.7
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 2.1e-10 70.9 92 47.8


User provided reference genes

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