Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011184g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.3e-42 176.0 88 100.0
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.0e-25 116.7 64 87.5
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 5.7e-11 70.9 75 53.3
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.7e-11 70.1 91 49.5
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.7e-10 68.2 91 47.3
PGSC0003DMG400042227 Solanum tuberosum HOM05D003712 ORTHO05D004368 3.7e-10 68.2 75 53.3
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 1.1e-09 66.6 90 48.9
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 2.4e-09 65.5 89 44.9
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 2.4e-09 65.5 92 45.7
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.1e-09 65.1 95 45.3
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 6.9e-09 63.9 84 46.4
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 6.9e-09 63.9 92 44.6
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 6.9e-09 63.9 92 44.6
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 9.1e-09 63.5 99 41.4
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.5e-08 62.8 89 44.9
Sopen12g001540 Solanum pennellii HOM05D001600 ORTHO05D001502 3.4e-08 61.6 45 62.2
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 4.5e-08 61.2 88 45.5
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 4.5e-08 61.2 89 41.6
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 5.9e-08 60.8 88 44.3
CAN.G980.5 Capsicum annuum HOM05D004838 ORTHO05D005373 2.2e-07 58.9 69 53.6
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 2.2e-07 58.9 90 42.2
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.9e-07 58.5 91 41.8
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 3.8e-07 58.2 88 39.8
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 5.0e-07 57.8 88 43.2
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 5.0e-07 57.8 85 41.2
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 8.5e-07 57.0 89 39.3
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 8.5e-07 57.0 91 40.7
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 1.1e-06 56.6 77 40.3
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.4e-06 56.2 72 41.7
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.4e-06 56.2 88 42.0
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 1.9e-06 55.8 88 39.8
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 2.5e-06 55.5 88 40.9
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 3.2e-06 55.1 84 41.7
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.5e-06 54.3 91 39.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 5.5e-06 54.3 88 39.8
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 7.2e-06 53.9 88 36.4
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 7.2e-06 53.9 81 42.0
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 7.2e-06 53.9 90 41.1
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 9.4e-06 53.5 86 40.7


User provided reference genes

Program Settings