Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.7e-129 466.1 251 100.0
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 4.4e-109 398.3 278 81.7
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 6.4e-100 367.9 242 81.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 6.6e-97 357.8 247 78.1
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 7.4e-72 274.6 249 61.4
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 2.1e-71 273.1 240 62.5
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 5.0e-68 261.9 249 57.4
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 9.3e-67 257.7 249 57.0
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.3e-65 253.8 244 57.0
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 8.7e-65 251.1 251 54.6
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.1e-64 250.8 251 54.2
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 9.7e-64 247.7 243 55.6
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 9.7e-64 247.7 243 55.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.3e-63 247.3 245 53.5
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.6e-63 246.9 244 55.3
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 3.7e-63 245.7 249 54.6
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 4.8e-63 245.4 244 54.1
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 7.7e-61 238.0 249 52.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 7.7e-61 238.0 245 51.8
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.3e-60 237.3 248 52.4
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 1.1e-59 234.2 249 52.2
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 3.2e-59 232.6 244 53.3
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 4.2e-59 232.3 243 53.5
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 5.5e-59 231.9 245 51.4
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 5.5e-59 231.9 244 50.8
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.7e-58 229.6 249 51.4
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.7e-58 229.6 247 51.0
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 4.6e-58 228.8 249 51.8
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-57 226.9 252 51.2
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.8e-57 226.9 244 52.5
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 2.3e-57 226.5 244 49.2
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 5.1e-57 225.3 243 49.0
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 6.7e-57 224.9 244 50.0
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 3.3e-56 222.6 244 49.6
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 3.3e-56 222.6 249 50.2
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 4.3e-56 222.2 274 48.2
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 7.4e-56 221.5 244 49.6
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 9.7e-56 221.1 244 49.2
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 3.7e-55 219.2 249 49.8
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 4.8e-55 218.8 244 48.8
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 4.8e-55 218.8 295 44.4
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 6.3e-55 218.4 212 57.1
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 1.8e-54 216.9 249 50.6
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-54 216.9 250 49.6
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 9.1e-54 214.5 246 46.7
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 1.2e-53 214.2 244 48.0
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 2.0e-53 213.4 244 48.8
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.0e-53 213.4 249 49.8
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 3.4e-53 212.6 249 46.6
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 4.5e-53 212.2 249 48.6
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 7.7e-53 211.5 198 59.6
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.3e-52 210.7 249 46.2
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.2e-52 209.9 262 45.8
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 3.8e-52 209.1 249 47.8
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 6.5e-52 208.4 249 45.4
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 2.5e-51 206.5 249 46.6
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.6e-50 203.8 223 49.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 6.1e-50 201.8 243 47.3
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.4e-49 200.7 244 48.8
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 3.9e-49 199.1 244 46.3
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.2e-47 193.4 245 49.0
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.1e-46 191.0 189 52.4
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.2e-45 187.6 228 44.3
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 2.0e-45 186.8 249 46.6
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 1.7e-44 183.7 202 50.5
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 2.9e-44 183.0 243 45.3
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 5.0e-44 182.2 228 43.4
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 4.2e-43 179.1 249 43.8
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 7.2e-43 178.3 249 43.8
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 2.7e-42 176.4 244 43.0
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 8.0e-42 174.9 242 42.6
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 2.3e-41 173.3 256 41.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 5.2e-41 172.2 228 46.9
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.0e-40 170.2 249 41.0
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 7.5e-40 168.3 267 39.7
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 2.2e-39 166.8 242 40.1
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.1e-38 164.5 249 41.0
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 5.0e-36 155.6 260 40.4
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.1e-35 154.5 194 46.4
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 5.5e-35 152.1 233 40.3
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.2e-34 151.0 163 52.8
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 6.1e-34 148.7 145 55.2
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.4e-30 135.6 125 58.4
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.0e-29 133.7 249 34.9
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 2.0e-29 133.7 144 49.3
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.3e-28 131.0 119 59.7
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 4.7e-26 122.5 126 51.6
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 4.5e-21 105.9 122 48.4
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 1.9e-19 100.5 126 40.5
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.1e-18 97.1 173 38.7
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 1.0e-17 94.7 126 42.9
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 4.4e-16 89.4 97 53.6
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 5.4e-14 82.4 78 53.8
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 1.1e-11 74.7 86 47.7
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 3.3e-11 73.2 243 24.7
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 1.4e-09 67.8 123 37.4
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 5.8e-08 62.4 97 42.3
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 3.7e-07 59.7 145 27.6
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 4.1e-06 56.2 66 43.9
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 9.2e-06 55.1 61 42.6


User provided reference genes

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