Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 3.0e-105 385.2 192 100.0
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 1.2e-85 320.1 170 94.1
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.3e-84 316.6 177 89.8
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.3e-84 316.6 177 89.8
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.3e-84 316.6 177 89.8
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.3e-84 316.6 177 89.8
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.3e-84 316.6 177 89.8
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 6.4e-84 314.3 170 92.9
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 5.4e-83 311.2 170 92.4
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.4e-78 296.6 159 93.1
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 4.6e-74 281.6 170 84.1
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 6.7e-73 277.7 159 88.1
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.8e-70 269.6 167 79.6
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 5.3e-70 268.1 145 91.7
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 4.9e-68 261.5 165 76.4
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 1.1e-67 260.4 170 76.5
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 1.1e-67 260.4 170 76.5
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.2e-67 258.8 169 75.7
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 5.5e-67 258.1 168 75.6
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 5.5e-67 258.1 168 75.6
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 7.1e-67 257.7 170 74.7
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-66 255.8 167 76.6
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-66 255.8 167 76.6
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-66 255.8 167 76.6
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-66 255.8 167 76.6
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.9e-66 254.2 167 76.0
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-65 253.8 167 76.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.8e-65 253.1 167 75.4
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 7.4e-64 247.7 175 69.7
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.6e-63 246.5 170 71.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 6.3e-63 244.6 170 73.5
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.8e-62 243.0 170 72.4
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 2.4e-62 242.7 170 72.9
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 7.6e-61 237.7 170 69.4
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.8e-60 235.3 167 72.5
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 5.0e-60 235.0 168 72.6
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 8.5e-60 234.2 167 68.9
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.4e-59 233.4 173 69.9
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 1.9e-59 233.0 170 68.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 2.5e-59 232.6 170 68.8
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 4.2e-59 231.9 168 72.0
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 1.2e-58 230.3 122 94.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.0e-57 227.3 166 68.7
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 2.3e-57 226.1 182 62.6
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 3.9e-57 225.3 164 71.3
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 8.8e-57 224.2 165 67.3
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.7e-56 221.5 167 68.9
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 8.2e-55 217.6 168 66.7
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 8.2e-55 217.6 144 72.9
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.3e-54 214.9 190 60.5
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.6e-53 212.6 178 63.5
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 7.7e-53 211.1 149 78.5
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 5.0e-52 208.4 170 65.9
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.4e-51 206.8 170 64.7
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 3.2e-51 205.7 161 66.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 9.4e-51 204.1 168 63.1
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 7.4e-48 194.5 168 64.3
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 5.3e-46 188.3 174 59.8
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.2e-44 183.0 146 65.8
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.2e-44 183.0 146 65.8
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 1.4e-43 180.3 119 77.3
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.6e-42 176.8 117 74.4
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-42 175.6 170 59.4
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.4e-41 173.7 172 57.6
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 3.9e-41 172.2 165 58.8
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 6.7e-41 171.4 120 71.7
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 9.7e-40 167.5 132 62.9
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 3.7e-39 165.6 143 63.6
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.4e-38 162.9 130 66.9
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-37 160.6 167 55.7
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.5e-37 158.7 114 71.1
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 1.0e-36 157.5 85 89.4
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.2e-35 152.5 117 68.4
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 6.7e-33 144.8 104 70.2
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.8e-30 136.7 170 47.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.3e-28 130.6 87 72.4
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 3.8e-28 129.0 83 75.9
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.9e-27 126.7 94 66.0
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-27 126.7 189 42.9
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 2.5e-27 126.3 73 80.8
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 2.1e-26 123.2 126 56.3
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.6e-26 122.5 83 73.5
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.0e-26 121.3 86 70.9
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.3e-25 119.8 82 75.6
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 2.4e-22 109.8 72 69.4
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 5.4e-22 108.6 159 41.5
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 2.7e-21 106.3 107 51.4
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.1e-19 100.9 81 60.5
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 8.0e-18 94.7 75 62.7
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 4.0e-17 92.4 63 82.5
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.6e-16 89.7 65 66.2
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.8e-15 86.3 58 70.7
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 2.8e-15 86.3 55 76.4
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 3.7e-15 85.9 59 72.9
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 8.3e-15 84.7 94 54.3
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 1.8e-14 83.6 56 75.0
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.1e-14 82.4 52 82.7
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 5.9e-13 78.6 51 66.7
SMO086G0023 Selaginella moellendorffii HOM05D004473 ORTHO05D005652 2.9e-12 76.3 162 37.0
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.9e-11 73.6 70 57.1
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.5e-11 73.2 50 74.0
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 7.3e-11 71.6 53 67.9
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 1.4e-09 67.4 42 71.4
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 1.4e-09 67.4 38 76.3
Nn3g16148 Nelumbo nucifera HOM05D004473 ORTHO05D005652 3.1e-09 66.2 49 71.4
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.5e-08 63.9 43 67.4
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 9.8e-08 61.2 54 63.0
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 3.7e-07 59.3 51 58.8
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 8.3e-07 58.2 42 76.2
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 1.9e-06 57.0 105 34.3
Mapoly1406s0001 Marchantia polymorpha HOM05D004473 ORTHO05D005652 2.4e-06 56.6 74 37.8
Os11g0517350 Oryza sativa ssp. japonica HOM05D004473 ORTHO05D005652 9.2e-06 54.7 48 56.2


User provided reference genes

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