Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010969g0020 Nicotiana tabacum HOM05D007124 ORTHO05D008980 3.7e-32 141.0 72 100.0
Nitab4.5_0000755g0100 Nicotiana tabacum HOM05D007124 ORTHO05D008980 2.4e-31 138.3 72 97.2
PGSC0003DMG400026339 Solanum tuberosum HOM05D007124 ORTHO05D008980 4.9e-29 130.6 72 94.4
Peaxi162Scf00040g00004 Petunia axillaris HOM05D007124 ORTHO05D008980 8.4e-29 129.8 72 94.4
Sopen11g027200 Solanum pennellii HOM05D007124 ORTHO05D008980 3.2e-28 127.9 72 93.1
Hma1.2p1_0036F.1_g023250 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 6.0e-27 123.6 68 88.2
Hma1.2p1_1332F.1_g276070 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 1.8e-26 122.1 68 88.2
Lsat_1_v5_gn_5_3160 Lactuca sativa HOM05D007124 ORTHO05D008980 2.3e-26 121.7 70 84.3
CSS0008346 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 3.0e-26 121.3 64 92.2
CSS0015017 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 3.0e-26 121.3 64 92.2
CSS0017817 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 3.0e-26 121.3 64 92.2
CSS0011277 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 8.7e-26 119.8 64 90.6
Oeu013124.1 Olea europaea HOM05D007124 ORTHO05D008980 4.3e-25 117.5 72 80.6
Migut.H01802 Erythranthe guttata HOM05D007124 ORTHO05D008980 5.7e-25 117.1 67 85.1
Sed0025305 Sechium edule HOM05D007124 ORTHO05D008980 5.7e-25 117.1 72 80.6
SGA_v2.0_scaffold363G49951 Striga asiatica HOM05D007124 ORTHO05D008980 7.4e-25 116.7 70 81.4
Actinidia32270 Actinidia chinensis HOM05D002089 ORTHO05D002848 2.1e-24 115.2 64 84.4
ATR0317G094 Amborella trichopoda HOM05D007124 ORTHO05D008980 2.1e-24 115.2 67 83.6
THA.LOC104811625 Tarenaya hassleriana HOM05D007124 ORTHO05D008980 2.1e-24 115.2 72 76.4
Manes.12G070300 Manihot esculenta HOM05D007124 ORTHO05D008980 4.8e-24 114.0 68 79.4
Nn1g07252 Nelumbo nucifera HOM05D007124 ORTHO05D008980 4.8e-24 114.0 64 85.9
Carub.0008s1542 Capsella rubella HOM05D007124 ORTHO05D008980 8.2e-24 113.2 71 76.1
DCAR_009645 Daucus carota HOM05D007124 ORTHO05D008980 8.2e-24 113.2 64 85.9
Eucgr.F00713 Eucalyptus grandis HOM05D007124 ORTHO05D008980 8.2e-24 113.2 72 81.9
Sp6g17060 Schrenkiella parvula HOM05D007124 ORTHO05D008980 8.2e-24 113.2 68 79.4
Ciclev10009664m.g Citrus clementina HOM05D007124 ORTHO05D008980 1.4e-23 112.5 63 81.0
PGR004G2244 Punica granatum HOM05D007124 ORTHO05D008980 1.4e-23 112.5 72 80.6
AL8G30630 Arabidopsis lyrata HOM05D007124 ORTHO05D008980 1.8e-23 112.1 68 77.9
AT5G55125 Arabidopsis thaliana HOM05D007124 ORTHO05D008980 1.8e-23 112.1 68 77.9
BcaC03g14263 Brassica carinata HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
A02p09870 Brassica napus HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
A10p12390 Brassica napus HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
C02p16400 Brassica napus HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
C09p45870 Brassica napus HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
BolC2t07742H Brassica oleracea HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
BraA02t06051Z Brassica rapa HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
BraA10t43334Z Brassica rapa HOM05D007124 ORTHO05D008980 1.8e-23 112.1 64 82.8
BcaB08g35876 Brassica carinata HOM05D007124 ORTHO05D008980 4.0e-23 110.9 64 81.2
Potri.001G314100 Populus trichocarpa HOM05D007124 ORTHO05D008980 4.0e-23 110.9 68 77.9
BcaC04g20268 Brassica carinata HOM05D007124 ORTHO05D008980 5.3e-23 110.5 64 81.2
BolC9t57437H Brassica oleracea HOM05D007124 ORTHO05D008980 5.3e-23 110.5 64 81.2
CiPaw.12G132500 Carya illinoinensis HOM05D007124 ORTHO05D008980 5.3e-23 110.5 61 83.6
QL08p007019 Quercus lobata HOM05D007124 ORTHO05D008980 5.3e-23 110.5 64 82.8
Solyc11g068490.1 Solanum lycopersicum HOM05D007124 ORTHO05D008980 5.3e-23 110.5 64 92.2
SGA_v2.0_scaffold120G32846 Striga asiatica HOM05D007124 ORTHO05D008980 6.9e-23 110.2 59 88.1
MBI15_g24201_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 9.0e-23 109.8 68 77.9
Sabra16G0198600 Salix brachista HOM05D007124 ORTHO05D008980 9.0e-23 109.8 62 82.3
CiPaw.11G193400 Carya illinoinensis HOM05D007124 ORTHO05D008980 1.2e-22 109.4 61 82.0
Ciclev10010691m.g Citrus clementina HOM05D007124 ORTHO05D008980 1.2e-22 109.4 72 76.4
Psat0s3039g0080 Pisum sativum HOM05D007124 ORTHO05D008980 1.2e-22 109.4 68 76.5
Aa31LG3G11120 Aethionema arabicum HOM05D007124 ORTHO05D008980 1.5e-22 109.0 67 79.1
Duzib170G0848 Durio zibethinus HOM05D007124 ORTHO05D008980 1.5e-22 109.0 71 76.1
Duzib213G1022 Durio zibethinus HOM05D007124 ORTHO05D008980 1.5e-22 109.0 71 76.1
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 2.0e-22 108.6 67 77.6
Lalb_Chr15g0089611 Lupinus albus HOM05D007124 ORTHO05D008980 2.0e-22 108.6 68 75.0
MBI08_g04916_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 2.0e-22 108.6 68 76.5
TWI39G0219 Tripterygium wilfordii HOM05D007124 ORTHO05D008980 2.0e-22 108.6 69 79.7
CARHR268480 Cardamine hirsuta HOM05D007124 ORTHO05D008980 3.4e-22 107.8 68 75.0
Thhalv10015372m.g Eutrema salsugineum HOM05D007124 ORTHO05D008980 3.4e-22 107.8 68 75.0
Cpa.g.sc12.260 Carica papaya HOM05D007124 ORTHO05D008980 4.5e-22 107.5 72 76.4
Medtr2g014910 Medicago truncatula HOM05D007124 ORTHO05D008980 4.5e-22 107.5 69 73.9
Os11g0516100 Oryza sativa ssp. japonica HOM05D007124 ORTHO05D008980 4.5e-22 107.5 68 75.0
arahy.Tifrunner.gnm1.ann1.902QMU Arachis hypogaea HOM05D007124 ORTHO05D008980 5.8e-22 107.1 68 75.0
Lalb_Chr18g0059321 Lupinus albus HOM05D007124 ORTHO05D008980 5.8e-22 107.1 67 74.6
EL10Ac7g17641 Beta vulgaris HOM05D007124 ORTHO05D008980 7.6e-22 106.7 64 78.1
AUR62008759 Chenopodium quinoa HOM05D007124 ORTHO05D008980 7.6e-22 106.7 72 73.6
AUR62025479 Chenopodium quinoa HOM05D007124 ORTHO05D008980 7.6e-22 106.7 72 73.6
SHI10538 Sapria himalayana HOM05D007124 ORTHO05D008980 7.6e-22 106.7 68 75.0
Glyma.10G051000 Glycine max HOM05D007124 ORTHO05D008980 1.0e-21 106.3 68 75.0
Sc12g0005860 Simmondsia chinensis HOM05D007124 ORTHO05D008980 1.0e-21 106.3 72 77.8
arahy.Tifrunner.gnm1.ann1.E6QS8A Arachis hypogaea HOM05D007124 ORTHO05D008980 1.3e-21 105.9 68 73.5
CANSAT11G2294 Cannabis sativa HOM05D007124 ORTHO05D008980 1.3e-21 105.9 58 81.0
Glyma.13G138500 Glycine max HOM05D007124 ORTHO05D008980 1.3e-21 105.9 68 75.0
Glyma.13G152338 Glycine max HOM05D007124 ORTHO05D008980 1.3e-21 105.9 68 75.0
Medtr2g014940 Medicago truncatula HOM05D007124 ORTHO05D008980 1.3e-21 105.9 69 73.9
Phvul.006G180400 Phaseolus vulgaris HOM05D007124 ORTHO05D008980 1.3e-21 105.9 68 73.5
FvH4_3g23350 Fragaria vesca HOM05D007124 ORTHO05D008980 1.7e-21 105.5 58 79.3
Lj6g0008322 Lotus japonicus HOM05D007124 ORTHO05D008980 1.7e-21 105.5 68 73.5
Gohir.1Z049637 Gossypium hirsutum HOM05D007124 ORTHO05D008980 2.2e-21 105.1 71 71.8
Thecc.07G030700 Theobroma cacao HOM05D007124 ORTHO05D008980 2.2e-21 105.1 72 73.6
FAN05G4905 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
FAN11G2242 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
FAN16G3348 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
FAN21G2784 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
FAN25G2055 Fragaria x ananassa HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
Gohir.D05G373400 Gossypium hirsutum HOM05D007124 ORTHO05D008980 3.8e-21 104.4 71 71.8
Gorai.009G442100 Gossypium raimondii HOM05D007124 ORTHO05D008980 3.8e-21 104.4 71 71.8
Psat1g201480 Pisum sativum HOM05D007124 ORTHO05D008980 3.8e-21 104.4 68 73.5
RcHm_v2.0_Chr5g0041121 Rosa chinensis HOM05D007124 ORTHO05D008980 3.8e-21 104.4 58 77.6
FAN02G4031 Fragaria x ananassa HOM05D007124 ORTHO05D008980 5.0e-21 104.0 67 70.1
Ca_00376_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 6.5e-21 103.6 68 72.1
Ca_00400_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 6.5e-21 103.6 68 72.1
Cfa020296 Carpinus fangiana HOM05D007124 ORTHO05D008980 8.4e-21 103.2 64 76.6
Haze_09723 Corylus avellana HOM05D007124 ORTHO05D008980 8.4e-21 103.2 65 76.9
Prupe.4G220900 Prunus persica HOM05D007124 ORTHO05D008980 8.4e-21 103.2 58 77.6
Ah.15g092770 Amaranthus hybridus HOM05D007124 ORTHO05D008980 1.4e-20 102.4 62 79.0
HPP92_015305 Vanilla planifolia HOM05D007124 ORTHO05D008980 1.9e-20 102.1 63 73.0
PSO675G6679 Papaver somniferum HOM05D007124 ORTHO05D008980 2.5e-20 101.7 70 68.6
vmacro13375 Vaccinium macrocarpon HOM05D007124 ORTHO05D008980 2.5e-20 101.7 64 79.7
Aqoxy1G03004 Aquilegia oxysepala HOM05D007124 ORTHO05D008980 3.2e-20 101.3 64 75.0
Cc05_g14150 Coffea canephora HOM05D007124 ORTHO05D008980 4.2e-20 100.9 68 70.6
HanXRQChr08g0233551 Helianthus annuus HOM05D007124 ORTHO05D008980 4.2e-20 100.9 64 78.1
ECA246G4235 Erigeron canadensis HOM05D007124 ORTHO05D008980 1.2e-19 99.4 50 92.0
FvH4_6g31480 Fragaria vesca HOM05D007124 ORTHO05D008980 1.2e-19 99.4 67 68.7
MELO3C004505.2 Cucumis melo HOM05D007124 ORTHO05D008980 3.9e-18 94.4 77 66.2
Glyma.10G069200 Glycine max HOM05D007124 ORTHO05D008980 5.1e-18 94.0 62 72.6
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 5.7e-17 90.5 62 74.2
CsaV3_2G002880 Cucumis sativus L. HOM05D007124 ORTHO05D008980 1.3e-16 89.4 64 64.1
BcaB05g22183 Brassica carinata HOM05D007124 ORTHO05D008980 3.7e-16 87.8 56 75.0
MD03G1195200 Malus domestica HOM05D007124 ORTHO05D008980 1.1e-15 86.3 62 67.7
unitig_0.g1624 Utricularia gibba HOM05D007124 ORTHO05D008980 1.1e-07 59.7 45 64.4
Mapoly0141s0007 Marchantia polymorpha HOM05D007124 ORTHO05D008980 1.8e-07 58.9 58 44.8


User provided reference genes

Program Settings