Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.9e-116 422.5 215 100.0
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.5e-113 412.9 215 97.7
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 2.0e-97 359.4 215 84.2
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 1.1e-95 353.6 216 83.3
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 3.9e-90 335.1 216 80.6
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 1.1e-89 333.6 215 79.5
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.2e-59 233.8 203 57.1
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 1.0e-58 230.7 208 58.7
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 2.3e-58 229.6 190 58.9
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 2.6e-57 226.1 210 53.3
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 3.7e-56 222.2 192 56.8
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 4.9e-56 221.9 203 59.1
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 3.2e-55 219.2 204 53.4
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 3.2e-55 219.2 207 51.2
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 4.1e-55 218.8 209 52.6
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 7.0e-55 218.0 205 55.6
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.2e-54 217.2 208 55.8
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.6e-54 216.9 189 56.1
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 2.0e-54 216.5 204 53.4
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 3.5e-54 215.7 208 55.3
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 7.8e-54 214.5 208 56.2
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 1.0e-53 214.2 190 56.8
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.3e-53 213.8 207 50.2
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.3e-53 213.0 207 49.8
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 3.9e-53 212.2 205 52.2
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 5.0e-53 211.8 207 49.3
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 6.6e-53 211.5 206 51.5
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 1.5e-52 210.3 203 53.2
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 1.5e-52 210.3 211 50.2
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 3.3e-52 209.1 205 50.2
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 3.3e-52 209.1 187 53.5
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 5.6e-52 208.4 209 49.3
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 5.6e-52 208.4 212 50.0
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 9.5e-52 207.6 210 49.0
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 3.6e-51 205.7 203 53.2
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 3.6e-51 205.7 199 52.3
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 4.7e-51 205.3 211 47.9
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 1.4e-50 203.8 199 48.7
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 1.4e-50 203.8 210 50.0
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 8.9e-50 201.1 205 51.7
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 8.9e-50 201.1 210 49.0
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 8.9e-50 201.1 210 51.0
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 8.9e-50 201.1 194 54.6
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 3.4e-49 199.1 216 48.1
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 5.8e-49 198.4 183 52.5
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.3e-48 197.2 213 48.4
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 1.7e-48 196.8 208 50.5
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 2.2e-48 196.4 211 46.9
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 2.2e-48 196.4 205 53.2
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 2.9e-48 196.1 214 49.1
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 2.9e-48 196.1 201 48.3
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 6.4e-48 194.9 200 53.0
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 6.4e-48 194.9 181 51.9
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 3.2e-47 192.6 218 48.6
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 1.2e-46 190.7 218 49.1
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 2.0e-46 189.9 213 49.8
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 3.5e-46 189.1 194 51.0
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.3e-45 187.2 171 48.5
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 1.5e-44 183.7 204 47.5
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.9e-44 183.3 204 47.5
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 5.6e-44 181.8 209 45.5
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 6.2e-43 178.3 193 47.7
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 6.8e-42 174.9 193 46.6
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 2.6e-41 172.9 206 45.6
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 7.5e-41 171.4 201 44.3
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 7.5e-41 171.4 200 46.5
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 9.8e-41 171.0 190 47.9
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 2.9e-40 169.5 206 46.1
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 3.7e-40 169.1 188 48.9
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 3.7e-40 169.1 194 45.9
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 4.9e-40 168.7 206 42.7
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 6.4e-40 168.3 206 42.7
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 4.1e-39 165.6 192 47.9
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 4.1e-39 165.6 192 47.9
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 7.1e-39 164.9 209 42.1
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 1.2e-38 164.1 188 47.3
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 6.0e-38 161.8 150 58.7
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 7.8e-38 161.4 206 41.3
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 1.7e-37 160.2 185 47.0
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 5.1e-37 158.7 207 43.5
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.1e-36 157.5 222 40.5
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 1.9e-36 156.8 192 46.4
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 4.3e-36 155.6 214 41.1
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 7.3e-36 154.8 194 44.3
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 7.3e-36 154.8 191 45.5
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 3.6e-35 152.5 194 43.8
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 4.7e-35 152.1 209 40.7
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 4.0e-34 149.1 220 39.5
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 6.8e-34 148.3 215 40.0
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 6.8e-34 148.3 215 40.0
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 6.8e-34 148.3 216 39.4
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 1.2e-33 147.5 221 37.6
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 1.2e-33 147.5 215 40.0
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.2e-33 147.5 190 41.1
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.5e-33 147.1 122 56.6
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 2.0e-33 146.7 214 39.3
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 2.0e-33 146.7 215 39.5
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 2.0e-33 146.7 213 37.6
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 7.6e-33 144.8 291 32.0
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 1.1e-31 141.0 209 37.3
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.6e-30 137.1 143 49.7
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 3.0e-29 132.9 194 41.8
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 8.1e-27 124.8 105 52.4
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 3.1e-26 122.9 144 47.9
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 2.0e-25 120.2 214 34.6
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.3e-24 117.5 214 34.1
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 3.8e-24 115.9 171 37.4
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 1.2e-22 110.9 117 52.1
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 1.7e-21 107.1 204 35.3
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 5.1e-21 105.5 190 34.2
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.3e-19 100.9 87 52.9
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 1.1e-18 97.8 85 51.8
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 1.8e-18 97.1 159 40.3
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 7.9e-14 81.6 134 34.3
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 6.2e-11 72.0 68 57.4
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 1.8e-10 70.5 58 62.1
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 2.0e-09 67.0 66 50.0
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 4.9e-08 62.4 89 36.0
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 1.4e-07 60.8 50 52.0


User provided reference genes

Program Settings