Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.0e-185 653.3 328 100.0
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 9.3e-184 646.7 328 98.8
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 4.8e-172 607.8 328 93.0
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 1.4e-168 596.3 328 90.2
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 3.0e-166 588.6 328 89.0
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 6.3e-164 580.9 328 88.4
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.1e-157 560.1 328 84.8
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.2e-154 550.1 328 82.9
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 2.7e-154 548.9 328 82.9
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 4.5e-154 548.1 328 82.6
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 3.8e-153 545.0 328 81.4
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.9e-152 542.7 303 89.1
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.7e-151 538.9 328 81.4
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.6e-151 538.5 330 81.5
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 8.8e-150 533.9 328 80.8
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.5e-149 533.1 329 80.2
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 5.7e-149 531.2 328 80.2
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 4.8e-148 528.1 328 79.6
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.4e-147 525.8 327 78.9
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.1e-143 512.7 328 77.4
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 3.6e-143 511.9 328 78.7
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 3.6e-143 511.9 328 77.1
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.0e-142 510.4 328 76.8
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 2.3e-142 509.2 328 78.7
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 3.0e-142 508.8 328 77.1
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 6.8e-142 507.7 325 77.8
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 8.8e-142 507.3 328 76.5
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.5e-141 506.5 328 77.4
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.0e-141 506.1 328 76.5
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 3.4e-141 505.4 328 77.4
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 4.4e-141 505.0 328 76.5
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 8.3e-140 500.7 328 76.2
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.4e-139 500.0 328 76.2
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.4e-139 499.2 328 75.9
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 5.4e-139 498.0 328 75.0
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 7.0e-139 497.7 328 75.6
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 3.5e-138 495.4 328 75.0
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 1.0e-137 493.8 328 75.6
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.3e-137 493.4 325 75.7
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-137 493.0 326 74.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 2.9e-137 492.3 328 75.6
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.1e-136 490.3 328 74.7
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.5e-136 490.0 328 74.4
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.5e-136 490.0 328 74.7
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 1.5e-136 490.0 326 74.2
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.9e-136 489.6 328 75.0
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.9e-136 489.6 328 75.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.9e-136 489.6 328 74.7
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 7.3e-136 487.6 328 74.4
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 7.3e-136 487.6 328 74.4
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 9.5e-136 487.3 329 74.5
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 2.1e-135 486.1 328 72.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 3.6e-135 485.3 328 73.5
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.0e-134 483.8 328 72.9
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 2.3e-134 482.6 328 72.9
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 6.8e-134 481.1 330 73.6
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 3.4e-133 478.8 330 72.7
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 5.7e-133 478.0 328 71.3
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 7.5e-133 477.6 328 71.6
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 9.8e-133 477.2 328 71.6
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 3.7e-132 475.3 328 72.0
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.7e-132 475.3 328 72.3
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 1.1e-131 473.8 328 71.0
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.4e-131 473.4 328 70.7
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 2.4e-131 472.6 328 71.3
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 4.1e-131 471.9 328 70.4
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 5.4e-131 471.5 328 70.7
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 7.0e-131 471.1 328 70.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 7.0e-131 471.1 328 71.0
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 7.0e-131 471.1 328 71.0
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 9.2e-131 470.7 328 70.7
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 5.9e-130 468.0 328 70.7
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.3e-129 466.8 328 70.1
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 3.9e-129 465.3 328 70.7
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.6e-129 464.5 326 71.8
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 1.9e-128 463.0 328 69.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.9e-128 463.0 328 68.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 5.6e-128 461.5 328 70.4
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.8e-127 459.1 328 69.5
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 8.0e-127 457.6 328 69.5
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 6.0e-122 441.4 328 65.5
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.7e-121 439.9 303 70.3
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.7e-121 439.9 328 67.1
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 5.0e-121 438.3 328 66.8
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.0e-121 438.3 326 68.1
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 8.6e-121 437.6 325 65.5
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.6e-119 432.2 306 70.9
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 6.2e-119 431.4 328 63.7
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-118 430.3 306 71.2
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.9e-115 419.9 327 62.4
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-114 415.2 313 68.7
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 4.6e-114 415.2 333 60.1
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.4e-107 392.9 326 59.8
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.2e-106 390.6 326 59.8
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.6e-106 390.2 265 73.2
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.9e-104 383.3 319 61.1
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.2e-103 380.6 328 59.8
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 4.7e-103 378.6 266 71.4
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.8e-102 376.7 323 56.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 4.9e-100 368.6 335 54.0
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 6.4e-100 368.2 325 55.1
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 6.0e-98 361.7 218 83.5
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.8e-98 361.3 328 56.4
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.6e-96 355.1 301 59.5
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.1e-95 351.3 324 54.0
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.3e-94 348.6 264 68.6
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.3e-92 344.0 236 75.0
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.2e-85 320.9 295 57.6
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.4e-83 313.2 329 49.2
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-82 310.5 313 55.3
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.1e-80 304.3 293 55.3
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 4.0e-78 295.8 227 65.2
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 9.4e-59 231.5 305 46.2
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 6.3e-47 192.2 121 77.7
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 4.1e-46 189.5 161 62.1
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.6e-34 149.8 115 67.0
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.8e-33 147.5 277 35.4
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.3e-31 138.7 102 62.7
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 5.9e-29 132.5 95 62.1
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 3.2e-27 126.7 124 55.6
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 4.7e-26 122.9 333 30.6
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-24 118.2 102 57.8
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 6.3e-23 112.5 72 75.0
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.4e-22 111.3 62 82.3
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 7.0e-22 109.0 337 26.1
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 3.5e-13 80.1 62 59.7


User provided reference genes

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