Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010824g0020 Nicotiana tabacum HOM05D004232 ORTHO05D004909 5.2e-201 704.1 346 100.0
Nitab4.5_0011109g0010 Nicotiana tabacum HOM05D004232 ORTHO05D004909 6.7e-124 448.0 411 59.9
Nitab4.5_0000660g0030 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.6e-101 373.6 372 59.4
Peaxi162Scf00155g00514 Petunia axillaris HOM05D004232 ORTHO05D004909 3.3e-94 349.4 438 46.6
Nitab4.5_0000843g0060 Nicotiana tabacum HOM05D004232 ORTHO05D004909 2.4e-81 306.6 368 52.7
Nitab4.5_0008408g0040 Nicotiana tabacum HOM05D004232 ORTHO05D004909 4.6e-64 249.2 216 63.9
Lsat_1_v5_gn_8_77581 Lactuca sativa HOM05D004232 ORTHO05D004909 8.7e-39 165.2 441 28.1
GSVIVG01001050001 Vitis vinifera HOM05D004232 ORTHO05D004909 1.8e-36 157.5 419 30.3
Cfa020866 Carpinus fangiana HOM05D004232 ORTHO05D004909 7.6e-35 152.1 450 28.2
Dinv41413 Davidia involucrata HOM05D004232 ORTHO05D004909 7.6e-35 152.1 327 33.0
Actinidia04270 Actinidia chinensis HOM05D004232 ORTHO05D004909 1.3e-34 151.4 326 31.6
QL02p091766 Quercus lobata HOM05D004232 ORTHO05D004909 3.8e-34 149.8 446 27.6
Sed0012168 Sechium edule HOM05D004232 ORTHO05D004909 3.8e-34 149.8 429 28.7
Actinidia04264 Actinidia chinensis HOM05D004232 ORTHO05D004909 4.9e-34 149.4 449 28.7
Lj9A711T51 Lonicera japonica HOM05D004232 ORTHO05D004909 8.4e-34 148.7 328 30.5
Rhsim01G0048800 Rhododendron simsii HOM05D004232 ORTHO05D004909 8.4e-34 148.7 379 28.2
Dinv42900 Davidia involucrata HOM05D004232 ORTHO05D004909 1.4e-33 147.9 327 32.4
Dinv43201 Davidia involucrata HOM05D004232 ORTHO05D004909 1.4e-33 147.9 327 32.4
ClCG06G012120 Citrullus lanatus HOM05D004232 ORTHO05D004909 2.5e-33 147.1 320 31.9
ECA236G3428 Erigeron canadensis HOM05D004232 ORTHO05D004909 2.1e-32 144.1 426 28.6
Rhsim01G0048700 Rhododendron simsii HOM05D004232 ORTHO05D004909 2.1e-32 144.1 408 27.2
PGR142G1232 Punica granatum HOM05D004232 ORTHO05D004909 3.5e-32 143.3 325 29.8
MD15G1157400 Malus domestica HOM05D004232 ORTHO05D004909 4.6e-32 142.9 324 30.9
vmacro21873 Vaccinium macrocarpon HOM05D004232 ORTHO05D004909 4.6e-32 142.9 284 33.5
CsaV3_1G028610 Cucumis sativus L. HOM05D004232 ORTHO05D004909 6.0e-32 142.5 363 29.8
Haze_19292 Corylus avellana HOM05D004232 ORTHO05D004909 7.9e-32 142.1 470 26.4
Sc08g0005080 Simmondsia chinensis HOM05D004232 ORTHO05D004909 1.0e-31 141.7 324 30.6
Rhsim01G0048900 Rhododendron simsii HOM05D004232 ORTHO05D004909 1.3e-31 141.4 433 26.8
Potri.018G112500 Populus trichocarpa HOM05D004232 ORTHO05D004909 3.0e-31 140.2 415 26.3
HPP92_023808 Vanilla planifolia HOM05D004232 ORTHO05D004909 5.1e-31 139.4 330 30.0
Lalb_Chr07g0179621 Lupinus albus HOM05D004232 ORTHO05D004909 8.7e-31 138.7 440 26.6
DCAR_019365 Daucus carota HOM05D004232 ORTHO05D004909 1.5e-30 137.9 291 34.0
Peaxi162Scf00113g00410 Petunia axillaris HOM05D004232 ORTHO05D004909 1.5e-30 137.9 301 31.6
Rhsim01G0048600 Rhododendron simsii HOM05D004232 ORTHO05D004909 1.9e-30 137.5 267 32.2
CSS0034823 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 2.5e-30 137.1 166 42.8
Nitab4.5_0000700g0080 Nicotiana tabacum HOM05D004232 ORTHO05D004909 2.5e-30 137.1 166 41.6
Thecc.09G036600 Theobroma cacao HOM05D004232 ORTHO05D004909 4.3e-30 136.3 386 27.5
TWI34G2022 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 4.3e-30 136.3 316 30.7
Lsat_1_v5_gn_8_59400 Lactuca sativa HOM05D004232 ORTHO05D004909 5.6e-30 136.0 405 30.6
arahy.Tifrunner.gnm1.ann1.TW5YT9 Arachis hypogaea HOM05D004232 ORTHO05D004909 7.4e-30 135.6 332 29.5
CSS0000460 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 7.4e-30 135.6 166 42.2
HanXRQChr05g0141511 Helianthus annuus HOM05D004232 ORTHO05D004909 7.4e-30 135.6 450 25.6
THA.LOC104808932 Tarenaya hassleriana HOM05D004232 ORTHO05D004909 7.4e-30 135.6 325 29.5
CiPaw.15G171200 Carya illinoinensis HOM05D004232 ORTHO05D004909 9.6e-30 135.2 418 29.2
Gorai.010G111300 Gossypium raimondii HOM05D004232 ORTHO05D004909 9.6e-30 135.2 390 27.2
Gohir.A06G096400 Gossypium hirsutum HOM05D004232 ORTHO05D004909 1.3e-29 134.8 389 27.5
MELO3C010252.2 Cucumis melo HOM05D004232 ORTHO05D004909 1.6e-29 134.4 297 33.0
Cc06_g23430 Coffea canephora HOM05D004232 ORTHO05D004909 2.1e-29 134.0 404 26.2
Eucgr.C00403 Eucalyptus grandis HOM05D004232 ORTHO05D004909 2.1e-29 134.0 315 30.2
TPR.G15784 Trifolium pratense HOM05D004232 ORTHO05D004909 2.1e-29 134.0 328 28.0
arahy.Tifrunner.gnm1.ann1.BI9JLD Arachis hypogaea HOM05D004232 ORTHO05D004909 2.8e-29 133.7 441 26.8
TAR625G0697 Trochodendron aralioides HOM05D004232 ORTHO05D004909 2.8e-29 133.7 326 30.4
Cc06_g23400 Coffea canephora HOM05D004232 ORTHO05D004909 3.7e-29 133.3 436 27.5
Nn8g39758 Nelumbo nucifera HOM05D004232 ORTHO05D004909 3.7e-29 133.3 328 29.0
CANSAT11G0555 Cannabis sativa HOM05D004232 ORTHO05D004909 4.8e-29 132.9 330 28.8
Ciclev10007957m.g Citrus clementina HOM05D004232 ORTHO05D004909 4.8e-29 132.9 326 28.2
Gohir.D06G096600 Gossypium hirsutum HOM05D004232 ORTHO05D004909 6.2e-29 132.5 389 27.2
MD02G1011700 Malus domestica HOM05D004232 ORTHO05D004909 1.1e-28 131.7 324 29.3
Nitab4.5_0000059g0500 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.8e-28 131.0 302 30.8
Atru.chr7.187 Acer truncatum HOM05D004232 ORTHO05D004909 2.4e-28 130.6 392 26.5
COL.COLO4_18748 Corchorus olitorius HOM05D004232 ORTHO05D004909 2.4e-28 130.6 167 38.9
AT1G80710 Arabidopsis thaliana HOM05D004232 ORTHO05D004909 3.1e-28 130.2 325 27.7
RcHm_v2.0_Chr2g0086391 Rosa chinensis HOM05D004232 ORTHO05D004909 3.1e-28 130.2 326 27.6
AL2G40720 Arabidopsis lyrata HOM05D004232 ORTHO05D004909 4.0e-28 129.8 330 28.2
Glyma.17G103900 Glycine max HOM05D004232 ORTHO05D004909 4.0e-28 129.8 434 24.9
Ca_21603_v3 Cicer arietinum L. HOM05D004232 ORTHO05D004909 5.3e-28 129.4 391 26.1
Sabra18G0095700 Salix brachista HOM05D004232 ORTHO05D004909 9.0e-28 128.6 325 28.0
FAN23G0432 Fragaria x ananassa HOM05D004232 ORTHO05D004909 1.2e-27 128.3 445 24.5
SGA_v2.0_scaffold387G50524 Striga asiatica HOM05D004232 ORTHO05D004909 1.2e-27 128.3 281 29.2
Nn2g12267 Nelumbo nucifera HOM05D004232 ORTHO05D004909 1.5e-27 127.9 326 30.1
Solyc02g014460.4 Solanum lycopersicum HOM05D004232 ORTHO05D004909 1.5e-27 127.9 302 31.1
CARHR073790 Cardamine hirsuta HOM05D004232 ORTHO05D004909 4.5e-27 126.3 166 38.6
BraA07t32003Z Brassica rapa HOM05D004232 ORTHO05D004909 5.8e-27 125.9 327 28.4
Thhalv10018400m.g Eutrema salsugineum HOM05D004232 ORTHO05D004909 5.8e-27 125.9 166 39.2
Carub.0002s2684 Capsella rubella HOM05D004232 ORTHO05D004909 1.0e-26 125.2 321 28.7
FAN26G2384 Fragaria x ananassa HOM05D004232 ORTHO05D004909 1.0e-26 125.2 319 27.0
HanXRQChr12g0386031 Helianthus annuus HOM05D004232 ORTHO05D004909 1.0e-26 125.2 321 28.0
Gohir.A06G096200 Gossypium hirsutum HOM05D004232 ORTHO05D004909 1.3e-26 124.8 366 27.0
PSO063G1432 Papaver somniferum HOM05D004232 ORTHO05D004909 1.3e-26 124.8 449 26.3
Sp5g35040 Schrenkiella parvula HOM05D004232 ORTHO05D004909 1.3e-26 124.8 166 39.8
Sopen02g003100 Solanum pennellii HOM05D004232 ORTHO05D004909 1.7e-26 124.4 302 30.1
BcaC08g47552 Brassica carinata HOM05D004232 ORTHO05D004909 2.2e-26 124.0 165 39.4
Migut.K00358 Erythranthe guttata HOM05D004232 ORTHO05D004909 2.9e-26 123.6 308 30.8
PGSC0003DMG400023181 Solanum tuberosum HOM05D004232 ORTHO05D004909 2.9e-26 123.6 301 28.6
MSTRG.26306 Avicennia marina HOM05D004232 ORTHO05D004909 3.8e-26 123.2 296 30.4
Lj4g0017422 Lotus japonicus HOM05D004232 ORTHO05D004909 3.8e-26 123.2 327 28.1
C06p53760 Brassica napus HOM05D004232 ORTHO05D004909 4.9e-26 122.9 167 38.9
FvH4_1g01460 Fragaria vesca HOM05D004232 ORTHO05D004909 6.5e-26 122.5 319 26.6
FAN19G1911 Fragaria x ananassa HOM05D004232 ORTHO05D004909 6.5e-26 122.5 319 26.6
A07p44980 Brassica napus HOM05D004232 ORTHO05D004909 1.1e-25 121.7 169 39.1
CARHR073800 Cardamine hirsuta HOM05D004232 ORTHO05D004909 1.4e-25 121.3 343 25.9
BcaC08g47551 Brassica carinata HOM05D004232 ORTHO05D004909 1.9e-25 120.9 327 27.8
BolC6t40394H Brassica oleracea HOM05D004232 ORTHO05D004909 1.9e-25 120.9 327 27.8
Psat4g032960 Pisum sativum HOM05D004232 ORTHO05D004909 2.5e-25 120.6 446 25.8
Glyma.13G156300 Glycine max HOM05D004232 ORTHO05D004909 3.2e-25 120.2 436 24.3
Hund21619 Selenicereus undatus HOM05D004232 ORTHO05D004909 7.1e-25 119.0 324 25.9
BolC6t40395H Brassica oleracea HOM05D004232 ORTHO05D004909 9.3e-25 118.6 168 38.7
ECA236G0371 Erigeron canadensis HOM05D004232 ORTHO05D004909 9.3e-25 118.6 284 31.3
FAN28G1469 Fragaria x ananassa HOM05D004232 ORTHO05D004909 9.3e-25 118.6 290 29.3
Medtr4g116900 Medicago truncatula HOM05D004232 ORTHO05D004909 9.3e-25 118.6 287 30.0
VMungo1215G2079 Vigna mungo HOM05D004232 ORTHO05D004909 9.3e-25 118.6 318 26.7
Glyma.13G156200 Glycine max HOM05D004232 ORTHO05D004909 1.6e-24 117.9 326 26.7
ATR0629G133 Amborella trichopoda HOM05D004232 ORTHO05D004909 4.6e-24 116.3 203 31.5
Ah.06g190350 Amaranthus hybridus HOM05D004232 ORTHO05D001990 6.0e-24 115.9 308 27.6
Manes.06G039700 Manihot esculenta HOM05D004232 ORTHO05D004909 7.9e-24 115.5 290 30.7
Aqoxy7G03502 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 1.0e-23 115.2 159 37.1
ECA234G1449 Erigeron canadensis HOM05D004232 ORTHO05D004909 1.0e-23 115.2 283 31.4
Phvul.003G175900 Phaseolus vulgaris HOM05D004232 ORTHO05D004909 1.0e-23 115.2 431 23.2
Medtr4g116910 Medicago truncatula HOM05D004232 ORTHO05D004909 1.3e-23 114.8 319 26.3
Zm00001eb028210 Zea mays HOM05D004232 ORTHO05D004909 5.1e-23 112.8 169 34.9
Aa31LG1G2250 Aethionema arabicum HOM05D004232 ORTHO05D004909 6.7e-23 112.5 166 35.5
SEGI_24126 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 8.7e-23 112.1 327 27.5
TPR.G15793 Trifolium pratense HOM05D004232 ORTHO05D004909 8.7e-23 112.1 338 25.7
ATR0629G116 Amborella trichopoda HOM05D004232 ORTHO05D004909 3.3e-22 110.2 196 31.1
Aqoxy7G03504 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 9.7e-22 108.6 305 29.5
EL10Ac1g00573 Beta vulgaris HOM05D004232 ORTHO05D004909 2.8e-21 107.1 300 28.0
C09p21710 Brassica napus HOM05D004232 ORTHO05D004909 2.8e-21 107.1 270 29.6
BolC9t55076H Brassica oleracea HOM05D004232 ORTHO05D004909 2.8e-21 107.1 270 29.6
unitig_52.g17569 Utricularia gibba HOM05D004232 ORTHO05D004909 2.8e-21 107.1 166 34.3
TWI63G0539 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 6.3e-21 105.9 293 29.0
BcaC04g22248 Brassica carinata HOM05D004232 ORTHO05D004909 1.4e-20 104.8 167 36.5
AUR62000901 Chenopodium quinoa HOM05D004232 ORTHO05D004909 1.8e-20 104.4 306 27.1
SEGI_07783 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 6.9e-20 102.4 154 34.4
Gorai.010G111100 Gossypium raimondii HOM05D004232 ORTHO05D004909 5.9e-19 99.4 366 25.1
Duzib168G1849 Durio zibethinus HOM05D004232 ORTHO05D004909 1.0e-18 98.6 357 24.1
COL.COLO4_17524 Corchorus olitorius HOM05D004232 ORTHO05D004909 1.3e-18 98.2 411 24.8
Os08g0282500 Oryza sativa ssp. japonica HOM05D004232 ORTHO05D004909 2.2e-18 97.4 165 29.7
Migut.G00058 Erythranthe guttata HOM05D004232 ORTHO05D004909 1.9e-17 94.4 306 28.1
SMO364G0327 Selaginella moellendorffii HOM05D004232 ORTHO05D004909 4.2e-17 93.2 288 24.0
Oeu051700.1 Olea europaea HOM05D004232 ORTHO05D004909 2.3e-15 87.4 476 23.7
Prupe.7G257900 Prunus persica HOM05D004232 ORTHO05D004909 3.9e-15 86.7 259 26.6
Ah.12g062460 Amaranthus hybridus HOM05D004232 ORTHO05D004909 7.4e-14 82.4 302 27.2
Gohir.D06G096401 Gossypium hirsutum HOM05D004232 ORTHO05D004909 1.3e-13 81.6 337 24.3
Rhsim01G0048400 Rhododendron simsii HOM05D004232 ORTHO05D004909 2.2e-13 80.9 326 24.2
AUR62005074 Chenopodium quinoa HOM05D004232 ORTHO05D004909 2.6e-11 73.9 324 21.6
Cpa.g.sc46.108 Carica papaya HOM05D004232 ORTHO05D004909 1.3e-10 71.6 105 36.2
CSS0018310 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 3.8e-10 70.1 85 41.2
CSS0031603 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 3.8e-10 70.1 85 41.2
QL05p008018 Quercus lobata HOM05D000129 ORTHO05D004909 1.4e-07 61.6 135 34.1
A09p17420 Brassica napus HOM05D004232 ORTHO05D004909 3.9e-07 60.1 175 28.0
QL05p007882 Quercus lobata HOM05D004232 ORTHO05D004909 5.7e-06 56.2 79 38.0


User provided reference genes

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