Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.3e-104 381.7 193 100.0
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.7e-100 369.4 193 96.4
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 2.8e-79 298.9 197 81.7
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.4e-78 296.6 196 81.6
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.4e-78 295.8 196 81.1
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.0e-69 266.2 197 75.6
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 1.9e-67 259.6 200 73.5
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 1.5e-59 233.4 202 62.4
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 7.2e-59 231.1 205 62.0
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.2e-53 213.8 201 58.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 6.5e-52 208.0 203 57.6
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.2e-51 205.7 187 58.8
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 2.1e-50 203.0 199 56.8
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 6.1e-50 201.4 202 56.4
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 3.0e-49 199.1 200 55.0
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 5.2e-49 198.4 202 55.9
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.2e-48 197.2 201 55.2
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 3.4e-48 195.7 201 52.2
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 4.4e-48 195.3 197 56.9
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 4.4e-48 195.3 205 53.2
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 5.7e-48 194.9 200 55.0
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 1.7e-47 193.4 204 52.9
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 2.8e-47 192.6 204 53.9
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 3.7e-47 192.2 188 60.6
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 4.8e-47 191.8 192 55.7
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 8.3e-47 191.0 191 55.5
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.8e-46 189.9 195 53.8
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.4e-46 189.5 212 54.2
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 9.1e-46 187.6 176 61.4
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 1.0e-44 184.1 191 55.5
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 2.9e-44 182.6 196 56.1
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 2.9e-44 182.6 200 54.5
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 5.0e-44 181.8 199 53.8
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 6.5e-44 181.4 189 53.4
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-43 180.3 185 56.8
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 1.9e-43 179.9 204 53.4
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 7.2e-43 177.9 204 53.4
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 9.4e-43 177.6 204 52.9
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 9.4e-43 177.6 197 52.8
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 1.6e-42 176.8 198 49.0
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 6.1e-42 174.9 208 52.4
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 8.0e-42 174.5 201 51.2
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.0e-41 174.1 207 51.7
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.0e-41 174.1 207 50.2
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.3e-41 172.9 196 53.6
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 3.0e-41 172.6 212 49.1
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.0e-41 172.2 196 53.1
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 8.8e-41 171.0 162 56.8
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.2e-40 170.6 197 51.3
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.5e-40 170.2 196 52.6
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.5e-40 170.2 196 53.1
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.5e-40 170.2 146 61.0
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 2.0e-40 169.9 191 51.3
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 2.6e-40 169.5 198 50.0
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 4.4e-40 168.7 193 51.3
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 5.7e-40 168.3 199 50.3
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 9.8e-40 167.5 154 55.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 3.7e-39 165.6 210 51.0
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 4.9e-39 165.2 221 47.5
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 4.9e-39 165.2 190 52.1
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 1.1e-38 164.1 233 46.8
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.1e-38 164.1 184 52.2
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.4e-38 163.7 194 50.0
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.4e-38 163.7 193 51.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.4e-38 163.7 193 51.8
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 5.4e-38 161.8 253 44.7
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 9.1e-38 161.0 104 72.1
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 2.7e-37 159.5 197 48.2
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 3.5e-37 159.1 227 44.5
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 4.5e-37 158.7 201 46.3
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.0e-36 157.5 197 49.7
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 5.0e-36 155.2 93 74.2
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.5e-35 152.9 178 48.3
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 2.1e-34 149.8 193 47.7
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.4e-33 147.1 202 46.0
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 1.8e-33 146.7 215 47.4
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 2.3e-33 146.4 186 51.1
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 3.0e-33 146.0 96 75.0
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 4.0e-33 145.6 213 47.4
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 4.0e-33 145.6 170 50.6
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 1.2e-32 144.1 122 62.3
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 1.2e-32 144.1 122 62.3
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 1.5e-32 143.7 222 46.4
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 2.0e-32 143.3 124 59.7
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.0e-32 143.3 211 46.0
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 5.7e-32 141.7 121 61.2
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 5.7e-32 141.7 140 55.7
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 5.7e-32 141.7 94 74.5
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 9.8e-32 141.0 221 46.2
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 1.3e-31 140.6 165 49.7
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.2e-31 139.8 211 45.5
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 3.7e-31 139.0 179 48.0
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 3.7e-31 139.0 191 47.6
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 3.7e-31 139.0 94 72.3
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 6.3e-31 138.3 190 46.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 6.3e-31 138.3 190 46.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 6.3e-31 138.3 190 46.8
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 8.3e-31 137.9 135 56.3
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 1.1e-30 137.5 190 45.3
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 2.4e-30 136.3 193 46.1
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 2.4e-30 136.3 193 46.1
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 5.4e-30 135.2 98 67.3
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 5.4e-30 135.2 98 67.3
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 5.4e-30 135.2 98 67.3
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.2e-29 134.0 190 45.8
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 7.8e-29 131.3 131 51.1
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.0e-24 116.7 179 40.8
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.3e-23 114.0 185 40.5
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 1.7e-23 113.6 185 44.9
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.9e-22 110.2 190 38.4
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 9.2e-22 107.8 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 9.2e-22 107.8 97 53.6
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.2e-22 107.8 123 45.5
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 2.0e-21 106.7 86 58.1
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 6.6e-20 101.7 98 50.0
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 9.5e-19 97.8 190 38.9
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.6e-16 89.7 59 72.9
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 4.4e-16 89.0 58 74.1
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.3e-15 87.4 87 51.7
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.3e-15 87.4 87 51.7
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.2e-15 86.7 67 70.1
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 4.9e-15 85.5 148 36.5
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.7e-13 79.7 143 36.4
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 6.0e-13 78.6 42 73.8
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 3.1e-09 66.2 120 35.8
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 8.9e-09 64.7 53 45.3
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 3.7e-07 59.3 194 28.4
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 8.4e-07 58.2 39 56.4
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 1.9e-06 57.0 66 51.5
BolC2t09172H Brassica oleracea HOM05D000194 ORTHO05D007246 7.1e-06 55.1 71 53.5


User provided reference genes

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