Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 0.0e+00 1087.8 528 100.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 8.6e-280 966.5 534 89.7
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 4.4e-268 927.5 527 87.1
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 3.4e-260 901.4 534 84.6
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 2.2e-259 898.7 534 84.3
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 4.9e-259 897.5 534 84.1
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 9.0e-221 770.4 533 72.6
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 2.5e-218 762.3 536 70.1
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.1e-218 760.8 534 72.1
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 2.1e-217 759.2 541 71.5
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 4.6e-217 758.1 527 70.4
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 6.0e-217 757.7 528 70.5
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.8e-216 756.1 529 70.3
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 3.9e-216 755.0 524 71.2
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 3.9e-216 755.0 516 71.5
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 5.1e-216 754.6 537 70.6
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.1e-215 753.4 520 71.0
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.1e-215 753.4 485 73.0
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 4.3e-215 751.5 535 71.2
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 9.7e-215 750.4 521 71.0
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.8e-214 748.0 472 74.8
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 4.8e-214 748.0 536 69.8
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 6.9e-213 744.2 540 68.3
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.0e-212 742.7 520 69.8
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 3.4e-212 741.9 532 69.4
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 7.6e-212 740.7 472 75.4
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 2.2e-211 739.2 532 68.6
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 6.5e-211 737.6 532 67.9
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 6.5e-211 737.6 528 69.9
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.4e-210 736.5 475 73.7
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 1.4e-210 736.5 526 69.0
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 3.2e-210 735.3 531 69.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 4.2e-210 734.9 490 72.2
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 5.5e-210 734.6 508 70.5
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 7.2e-210 734.2 537 67.6
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 7.2e-210 734.2 545 67.3
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 4.6e-209 731.5 557 66.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 6.1e-209 731.1 502 70.3
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 7.9e-209 730.7 502 70.3
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.0e-208 730.3 537 68.0
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 1.8e-208 729.6 534 68.4
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 1.8e-208 729.6 524 68.9
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.0e-208 728.8 500 71.6
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 6.7e-208 727.6 483 72.3
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 6.7e-208 727.6 488 71.3
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 8.8e-208 727.2 494 71.5
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 8.8e-208 727.2 535 69.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.1e-207 726.9 475 72.8
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.5e-207 725.7 534 66.9
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 5.7e-207 724.5 475 72.0
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.7e-207 723.8 536 66.6
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.7e-206 723.0 534 67.8
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 3.7e-206 721.8 536 67.9
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 4.8e-206 721.5 534 68.0
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 4.8e-206 721.5 534 68.0
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 6.3e-206 721.1 475 72.8
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 8.2e-206 720.7 536 67.5
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.1e-205 720.3 475 72.2
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 1.1e-205 720.3 520 68.8
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.1e-205 720.3 523 67.7
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.4e-205 719.9 533 67.7
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.4e-205 719.9 473 72.1
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 3.1e-205 718.8 470 73.8
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 5.3e-205 718.0 528 68.0
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.7e-203 713.0 482 71.6
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.9e-203 712.2 531 66.7
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 2.9e-203 712.2 518 66.4
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 2.9e-203 712.2 510 67.6
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 2.5e-202 709.1 539 66.6
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 2.5e-202 709.1 540 65.6
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.4e-202 707.2 563 63.1
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 1.6e-201 706.4 527 66.2
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 2.1e-201 706.1 479 73.1
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.0e-200 703.7 529 66.2
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 1.4e-200 703.4 462 71.9
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 1.8e-200 703.0 468 72.4
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.8e-200 703.0 472 72.9
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 5.1e-200 701.4 528 65.3
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 8.8e-200 700.7 502 67.3
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.0e-199 699.5 482 68.0
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 2.6e-199 699.1 513 67.4
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 2.2e-198 696.0 509 67.2
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.8e-197 693.0 470 70.2
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 2.4e-197 692.6 471 69.6
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.2e-196 690.3 459 71.5
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 4.5e-196 688.3 522 65.3
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 3.8e-195 685.3 468 71.4
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 3.8e-195 685.3 517 64.4
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 8.5e-195 684.1 487 66.3
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.6e-193 679.9 378 88.4
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 2.1e-193 679.5 498 66.1
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 2.0e-180 636.3 428 70.8
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 3.5e-180 635.6 467 67.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 1.7e-179 633.3 537 61.8
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 9.4e-178 627.5 481 65.3
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.1e-170 604.0 472 60.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.6e-169 599.0 511 58.9
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 4.7e-169 598.6 474 62.0
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 4.4e-167 592.0 462 61.5
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 7.5e-167 591.3 471 60.1
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 5.4e-165 585.1 405 69.9
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 1.5e-162 577.0 530 57.5
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 5.0e-155 552.0 410 69.5
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 2.4e-133 479.9 489 54.4
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.3e-131 474.2 303 73.6
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.2e-119 434.5 319 68.0
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 9.3e-117 424.9 485 47.0
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.2e-108 397.9 491 45.0
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 6.2e-105 385.6 286 67.1
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 5.5e-93 345.9 504 41.9
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.0e-75 288.5 466 39.5
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 4.1e-40 170.2 100 76.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.0e-34 151.4 242 37.2
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.9e-29 134.8 112 61.6
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.9e-29 134.8 112 61.6
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.9e-29 134.8 112 61.6
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.9e-29 134.8 112 61.6
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 7.6e-26 122.9 296 32.8
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 7.8e-23 112.8 78 64.1
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 4.9e-17 93.6 57 73.7
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 3.3e-13 80.9 43 90.7
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 7.1e-08 63.2 40 67.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 9.3e-08 62.8 41 78.0
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 3.5e-07 60.8 108 41.7


User provided reference genes

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