Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010695g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.8e-122 442.6 222 100.0
Solyc01g095130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 7.7e-89 330.9 255 68.2
Nitab4.5_0000915g0080 Nicotiana tabacum HOM05D003118 ORTHO05D003618 3.9e-85 318.5 216 79.6
Sopen01g038920 Solanum pennellii HOM05D003118 ORTHO05D003618 2.9e-80 302.4 303 55.4
Peaxi162Scf00020g01526 Petunia axillaris HOM05D003118 ORTHO05D003618 2.5e-79 299.3 252 65.5
PGSC0003DMG400000196 Solanum tuberosum HOM05D003118 ORTHO05D003618 2.2e-59 233.0 214 60.3
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 8.6e-56 221.1 251 46.6
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 8.9e-53 211.1 247 44.9
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 3.4e-52 209.1 272 42.3
GSVIVG01026973001 Vitis vinifera HOM05D003118 ORTHO05D003618 4.4e-52 208.8 246 45.1
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 5.4e-50 201.8 247 44.1
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 7.0e-50 201.4 255 43.1
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 1.8e-45 186.8 229 43.7
Cc02_g38610 Coffea canephora HOM05D003118 ORTHO05D003618 1.5e-44 183.7 261 39.8
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 5.4e-42 175.3 241 41.1
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 7.0e-42 174.9 265 38.5
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 8.6e-40 167.9 269 35.7
GSVIVG01019423001 Vitis vinifera HOM05D003118 ORTHO05D003618 4.3e-39 165.6 259 37.8
PSO384G4267 Papaver somniferum HOM05D003118 ORTHO05D003618 5.6e-39 165.2 244 37.3
PSO266G0031 Papaver somniferum HOM05D003118 ORTHO05D003618 6.2e-38 161.8 244 36.9
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 6.2e-38 161.8 245 37.6
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 8.1e-38 161.4 258 37.2
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 1.4e-37 160.6 238 37.0
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 1.4e-37 160.6 241 37.8
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 1.4e-37 160.6 257 37.7
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 3.1e-37 159.5 241 35.7
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 5.2e-37 158.7 241 36.5
QL02p033293 Quercus lobata HOM05D003118 ORTHO05D003618 1.2e-36 157.5 249 38.2
PSO266G0003 Papaver somniferum HOM05D003118 ORTHO05D003618 1.5e-36 157.1 228 39.5
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 1.5e-36 157.1 241 38.6
Ca_24533_v3 Cicer arietinum L. HOM05D003118 ORTHO05D003618 3.4e-36 156.0 234 35.0
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 3.4e-36 156.0 241 36.9
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 7.5e-36 154.8 241 37.3
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 9.8e-36 154.5 259 35.9
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 9.8e-36 154.5 259 35.9
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 9.8e-36 154.5 259 35.9
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 1.7e-35 153.7 245 36.7
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.7e-35 153.7 228 38.6
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.7e-35 153.7 228 38.6
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 3.7e-35 152.5 248 37.1
Glyma.01G222500 Glycine max HOM05D003118 ORTHO05D003618 4.9e-35 152.1 235 35.3
SalBow8G1076 Salvia bowleyana HOM05D003118 ORTHO05D003618 4.9e-35 152.1 256 34.4
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 8.3e-35 151.4 248 37.1
Rhsim02G0236100 Rhododendron simsii HOM05D003118 ORTHO05D003618 8.3e-35 151.4 242 37.2
Glyma.11G020900 Glycine max HOM05D003118 ORTHO05D003618 1.1e-34 151.0 252 34.1
Hund11431 Selenicereus undatus HOM05D003118 ORTHO05D003618 1.1e-34 151.0 246 35.8
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 1.4e-34 150.6 218 38.5
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 1.4e-34 150.6 241 36.9
PSO170G3062 Papaver somniferum HOM05D003118 ORTHO05D003618 1.4e-34 150.6 237 37.1
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.9e-34 150.2 241 36.1
Lsat_1_v5_gn_6_84940 Lactuca sativa HOM05D003118 ORTHO05D003618 3.2e-34 149.4 244 36.5
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 4.1e-34 149.1 241 35.3
CiPaw.11G129400 Carya illinoinensis HOM05D003118 ORTHO05D003618 7.1e-34 148.3 241 35.7
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 9.2e-34 147.9 260 37.7
PSO063G6388 Papaver somniferum HOM05D003118 ORTHO05D003618 9.2e-34 147.9 237 36.7
TPR.G6616 Trifolium pratense HOM05D003118 ORTHO05D003618 9.2e-34 147.9 271 33.2
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 2.1e-33 146.7 218 37.2
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 2.7e-33 146.4 255 34.1
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 3.5e-33 146.0 241 35.3
Psat2g183920 Pisum sativum HOM05D003118 ORTHO05D003618 4.6e-33 145.6 234 32.9
Migut.E01210 Erythranthe guttata HOM05D003118 ORTHO05D003618 6.0e-33 145.2 248 32.3
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 6.0e-33 145.2 270 34.4
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 6.0e-33 145.2 251 37.5
CANSAT21G1093 Cannabis sativa HOM05D003118 ORTHO05D003618 1.0e-32 144.4 242 34.7
SHI07074 Sapria himalayana HOM05D003118 ORTHO05D003618 1.0e-32 144.4 254 35.8
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla HOM05D003118 ORTHO05D003618 1.3e-32 144.1 246 37.0
Lalb_Chr09g0320801 Lupinus albus HOM05D003118 ORTHO05D003618 1.7e-32 143.7 236 32.6
VMungo1215G2430 Vigna mungo HOM05D003118 ORTHO05D003618 1.7e-32 143.7 252 33.3
Phvul.002G160400 Phaseolus vulgaris HOM05D003118 ORTHO05D003618 2.3e-32 143.3 236 33.1
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 3.9e-32 142.5 241 34.0
Lsat_1_v5_gn_7_2680 Lactuca sativa HOM05D003118 ORTHO05D003618 6.6e-32 141.7 258 35.3
Medtr5g009920 Medicago truncatula HOM05D003118 ORTHO05D003618 6.6e-32 141.7 234 32.1
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 1.5e-31 140.6 211 37.9
SGA_v2.0_scaffold144G35901 Striga asiatica HOM05D003118 ORTHO05D003618 1.5e-31 140.6 214 35.5
Eucgr.E00782 Eucalyptus grandis HOM05D003118 ORTHO05D003618 1.9e-31 140.2 220 36.8
SGA_v2.0_scaffold173G39132 Striga asiatica HOM05D003118 ORTHO05D003618 1.9e-31 140.2 235 35.3
HanXRQChr13g0416081 Helianthus annuus HOM05D003118 ORTHO05D003618 2.5e-31 139.8 253 34.0
Ah.12g052020 Amaranthus hybridus HOM05D003118 ORTHO05D003618 3.3e-31 139.4 211 38.9
A04p14690 Brassica napus HOM05D003118 ORTHO05D003618 3.3e-31 139.4 259 31.7
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 3.3e-31 139.4 259 34.4
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea HOM05D003118 ORTHO05D003618 4.3e-31 139.0 258 30.6
CANSAT21G0202 Cannabis sativa HOM05D003118 ORTHO05D003618 4.3e-31 139.0 265 31.3
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 4.3e-31 139.0 241 35.3
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 4.3e-31 139.0 241 35.3
BcaC02g08950 Brassica carinata HOM05D003118 ORTHO05D003618 5.6e-31 138.7 259 32.0
BcaC08g44538 Brassica carinata HOM05D003118 ORTHO05D003618 5.6e-31 138.7 261 30.7
C04p48560 Brassica napus HOM05D003118 ORTHO05D003618 5.6e-31 138.7 259 32.0
C06p20020 Brassica napus HOM05D003118 ORTHO05D003618 5.6e-31 138.7 261 30.7
BolC4t26449H Brassica oleracea HOM05D003118 ORTHO05D003618 5.6e-31 138.7 259 32.0
BraA04t17109Z Brassica rapa HOM05D003118 ORTHO05D003618 5.6e-31 138.7 259 32.0
AUR62019759 Chenopodium quinoa HOM05D003118 ORTHO05D003618 5.6e-31 138.7 193 38.3
A07p20860 Brassica napus HOM05D003118 ORTHO05D003618 1.2e-30 137.5 259 30.1
BraA07t29773Z Brassica rapa HOM05D003118 ORTHO05D003618 1.2e-30 137.5 259 30.1
Oeu042365.1 Olea europaea HOM05D003118 ORTHO05D003618 1.2e-30 137.5 235 34.5
BcaB02g07884 Brassica carinata HOM05D003118 ORTHO05D003618 2.8e-30 136.3 259 30.1
ClCG01G002310 Citrullus lanatus HOM05D003118 ORTHO05D003618 2.8e-30 136.3 179 39.7
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea HOM05D003118 ORTHO05D003618 8.1e-30 134.8 251 30.7
HanXRQChr04g0120811 Helianthus annuus HOM05D003118 ORTHO05D003618 1.1e-29 134.4 242 33.5
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 1.4e-29 134.0 203 36.0
Nitab4.5_0002231g0040 Nicotiana tabacum HOM05D003118 ORTHO05D003618 2.3e-29 133.3 253 34.4
Sp7g00460 Schrenkiella parvula HOM05D003118 ORTHO05D003618 2.3e-29 133.3 255 30.2
Sopen08g003990 Solanum pennellii HOM05D003118 ORTHO05D003618 3.1e-29 132.9 216 37.0
LjContig00312_ERROPOS870357g0013212 Lotus japonicus HOM05D003118 ORTHO05D003618 6.8e-29 131.7 215 32.1
Solyc08g008130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 8.9e-29 131.3 241 34.9
Thhalv10027658m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 1.2e-28 131.0 259 31.3
BcaB06g27629 Brassica carinata HOM05D003118 ORTHO05D003618 1.5e-28 130.6 265 29.4
Carub.0007s3389 Capsella rubella HOM05D003118 ORTHO05D003618 1.5e-28 130.6 263 31.6
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 1.5e-28 130.6 211 37.9
AL7G47820 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 2.0e-28 130.2 245 30.6
LjContig00312_ERROPOS870357g0002156 Lotus japonicus HOM05D003118 ORTHO05D003618 2.6e-28 129.8 209 33.0
Aa31LG9G490 Aethionema arabicum HOM05D003118 ORTHO05D003618 5.8e-28 128.6 258 29.5
BolC6t37186H Brassica oleracea HOM05D003118 ORTHO05D003618 7.6e-28 128.3 277 28.9
ECA240G3271 Erigeron canadensis HOM05D000115 ORTHO05D003618 9.9e-28 127.9 228 35.1
HanXRQChr17g0533861 Helianthus annuus HOM05D003118 ORTHO05D003618 9.9e-28 127.9 245 32.7
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 1.7e-27 127.1 249 34.5
Lsat_1_v5_gn_3_11501 Lactuca sativa HOM05D003118 ORTHO05D003618 1.7e-27 127.1 259 32.0
Medtr8g447390 Medicago truncatula HOM05D003118 ORTHO05D003618 1.7e-27 127.1 176 36.4
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 2.2e-27 126.7 265 31.3
AT5G41580 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 6.4e-27 125.2 245 30.2
CARHR287630 Cardamine hirsuta HOM05D003118 ORTHO05D003618 6.4e-27 125.2 238 31.5
CDE10G1109 Ceratophyllum demersum HOM05D003118 ORTHO05D003618 6.4e-27 125.2 238 30.3
THA.LOC104809363 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 1.1e-26 124.4 245 32.2
HPP92_002884 Vanilla planifolia HOM05D003118 ORTHO05D003618 1.1e-26 124.4 235 35.3
ECA236G1529 Erigeron canadensis HOM05D003118 ORTHO05D003618 1.9e-26 123.6 249 31.3
ECA246G2781 Erigeron canadensis HOM05D003118 ORTHO05D003618 1.9e-26 123.6 221 35.3
AUR62010758 Chenopodium quinoa HOM05D003118 ORTHO05D003618 2.4e-26 123.2 218 30.7
SEGI_33305 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 2.4e-26 123.2 214 34.6
HPP92_002895 Vanilla planifolia HOM05D003118 ORTHO05D003618 2.4e-26 123.2 235 34.9
HPP92_000528 Vanilla planifolia HOM05D003118 ORTHO05D003618 3.2e-26 122.9 252 29.8
HanXRQChr06g0166221 Helianthus annuus HOM05D003118 ORTHO05D003618 4.1e-26 122.5 221 35.3
CsaV3_5G002370 Cucumis sativus L. HOM05D003118 ORTHO05D003618 1.2e-25 120.9 220 32.3
THA.LOC104823601 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 1.2e-25 120.9 261 31.8
Zm00001eb375680 Zea mays HOM05D003118 ORTHO05D003618 6.0e-25 118.6 226 31.0
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 3.9e-24 115.9 231 32.9
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 3.3e-23 112.8 245 33.1
TPR.G24280 Trifolium pratense HOM05D003118 ORTHO05D003618 3.3e-23 112.8 243 28.0
CiPaw.12G088800 Carya illinoinensis HOM05D003118 ORTHO05D003618 1.2e-22 110.9 287 29.3
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 2.1e-22 110.2 240 31.2
EL10Ac5g12842 Beta vulgaris HOM05D003118 ORTHO05D003618 3.6e-22 109.4 178 34.8
Os06g0164000 Oryza sativa ssp. japonica HOM05D003118 ORTHO05D003618 3.6e-22 109.4 211 31.3
Hund14263 Selenicereus undatus HOM05D003118 ORTHO05D003618 2.2e-19 100.1 144 43.1
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 3.8e-19 99.4 221 29.0
AT1G08910 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 4.9e-19 99.0 221 29.0
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 6.4e-19 98.6 219 30.1
FAN18G3666 Fragaria x ananassa HOM05D003118 ORTHO05D003618 6.4e-19 98.6 104 47.1
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 1.1e-18 97.8 222 29.7
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 1.4e-18 97.4 219 30.6
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 1.9e-18 97.1 222 29.7
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 1.2e-17 94.4 218 27.5
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 1.6e-17 94.0 222 28.8
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 6.0e-17 92.0 222 28.8
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 7.8e-17 91.7 217 27.2
TPR.G24909 Trifolium pratense HOM05D003118 ORTHO05D003618 1.7e-16 90.5 172 30.2
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 3.9e-16 89.4 217 28.1
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 3.9e-16 89.4 217 28.1
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 6.6e-16 88.6 212 29.7
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 8.7e-16 88.2 217 26.7
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 8.7e-16 88.2 277 25.3
Sc01g0009900 Simmondsia chinensis HOM05D003118 ORTHO05D003618 1.5e-15 87.4 156 33.3
Pp3c25_1090 Physcomitrium patens HOM05D003118 ORTHO05D003618 2.5e-15 86.7 234 26.5
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 1.3e-14 84.3 206 26.2
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 1.1e-13 81.3 222 27.9
Mapoly0002s0236 Marchantia polymorpha HOM05D003118 ORTHO05D003618 1.1e-13 81.3 213 23.0
Cpa.g.sc201.12 Carica papaya HOM05D003118 ORTHO05D003618 2.4e-13 80.1 130 35.4
Medtr7g063200 Medicago truncatula HOM05D003118 ORTHO05D003618 2.4e-13 80.1 149 30.2
BraA06t23787Z Brassica rapa HOM05D003118 ORTHO05D003618 6.9e-13 78.6 227 27.3
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 4.5e-12 75.9 205 27.8
ECA236G4268 Erigeron canadensis HOM05D003118 ORTHO05D003618 9.9e-12 74.7 172 29.1
AagrBONN_evm.TU.Sc2ySwM_228.3604 Anthoceros agrestis HOM05D003118 ORTHO05D003618 1.3e-11 74.3 208 26.4
HanXRQChr11g0344401 Helianthus annuus HOM05D003118 ORTHO05D003618 1.3e-11 74.3 93 34.4
SMO116G0096 Selaginella moellendorffii HOM05D003118 ORTHO05D003898 3.8e-11 72.8 158 29.7
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 9.3e-10 68.2 111 32.4
Thhalv10007035m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 1.8e-08 63.9 169 26.0
BolC5t29453H Brassica oleracea HOM05D003118 ORTHO05D032428 2.3e-08 63.5 192 26.0
C05p06950 Brassica napus HOM05D003118 ORTHO05D003618 9.6e-07 58.2 181 24.3


User provided reference genes

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