Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010687g0060 Nicotiana tabacum HOM05D003666 ORTHO05D036870 1.3e-51 206.1 101 100.0
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.2e-22 107.1 55 96.4
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.2e-22 107.1 55 96.4
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.2e-22 107.1 55 96.4
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 8.2e-22 107.1 55 96.4
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 2.4e-21 105.5 107 58.9
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 6.9e-21 104.0 55 94.5
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 1.0e-19 100.1 55 89.1
GSVIVG01029664001 Vitis vinifera HOM05D003666 ORTHO05D004770 2.2e-19 99.0 54 90.7
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 3.8e-19 98.2 55 89.1
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.5e-19 97.1 55 89.1
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.5e-19 97.1 55 89.1
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.5e-19 97.1 55 89.1
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 7.2e-18 94.0 52 90.4
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 1.0e-16 90.1 55 81.8
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.0e-16 90.1 46 93.5
Nitab4.5_0000172g0170 Nicotiana tabacum HOM05D003666 ORTHO05D036870 1.5e-15 86.3 48 85.4
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 1.7e-14 82.8 43 93.0
Nitab4.5_0000172g1330 Nicotiana tabacum HOM05D003666 ORTHO05D016272 3.7e-14 81.6 43 90.7
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 1.4e-13 79.7 50 82.0
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.4e-13 79.7 50 82.0
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 1.4e-13 79.7 50 82.0
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 1.4e-13 79.7 50 82.0
Solyc10g045760.3 Solanum lycopersicum HOM05D003666 ORTHO05D036870 1.1e-10 70.1 48 68.8
Nitab4.5_0000172g0150 Nicotiana tabacum HOM05D016892 ORTHO05D016272 2.1e-09 65.9 34 91.2
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 9.7e-07 57.0 30 96.7
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 9.7e-07 57.0 42 76.2
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 9.7e-07 57.0 42 76.2
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 9.7e-07 57.0 42 76.2
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 9.7e-07 57.0 30 96.7
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 9.7e-07 57.0 30 96.7
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 9.7e-07 57.0 42 76.2
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 9.7e-07 57.0 30 96.7
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 9.7e-07 57.0 30 96.7
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 8.2e-06 53.9 35 80.0


User provided reference genes

Program Settings