Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 7.4e-77 290.4 143 100.0
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 4.7e-47 191.4 161 65.2
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 4.1e-35 151.8 85 84.7
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.8e-23 112.5 135 49.6
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 2.8e-23 112.5 162 42.6
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 8.0e-23 110.9 160 41.2
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 1.1e-22 110.5 157 44.6
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 5.2e-22 108.2 165 38.2
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 1.5e-21 106.7 162 40.1
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 2.6e-21 105.9 161 39.8
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 3.4e-21 105.5 162 43.2
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 4.4e-21 105.1 161 41.6
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 4.4e-21 105.1 164 43.9
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.3e-20 103.6 160 40.0
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 1.7e-20 103.2 168 39.3
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 2.9e-20 102.4 164 40.9
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 3.7e-20 102.1 162 40.1
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 3.7e-20 102.1 174 41.4
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 4.9e-20 101.7 161 41.0
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 6.4e-20 101.3 160 40.0
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.3e-20 100.9 161 39.1
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 8.3e-20 100.9 172 38.4
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.4e-19 100.1 171 39.2
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 1.4e-19 100.1 161 40.4
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.4e-19 100.1 160 37.5
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 1.9e-19 99.8 161 39.1
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.9e-19 99.8 161 39.1
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 2.4e-19 99.4 161 38.5
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.4e-19 99.4 161 42.2
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.4e-19 99.4 161 39.1
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.2e-19 99.0 161 37.9
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.1e-19 98.6 161 39.1
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 4.1e-19 98.6 158 41.8
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 9.2e-19 97.4 161 39.1
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.6e-18 96.7 164 37.8
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 1.6e-18 96.7 164 37.8
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 2.1e-18 96.3 171 38.0
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 3.5e-18 95.5 161 37.9
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 3.5e-18 95.5 161 37.9
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 6.0e-18 94.7 160 37.5
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 6.0e-18 94.7 161 37.9
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.0e-18 94.7 157 40.1
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 7.8e-18 94.4 157 39.5
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.3e-17 93.6 161 38.5
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.3e-17 92.8 164 35.4
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.3e-17 92.8 161 35.4
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 2.3e-17 92.8 171 37.4
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 2.3e-17 92.8 165 38.2
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.0e-17 92.4 164 37.8
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 3.9e-17 92.0 163 39.3
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 3.9e-17 92.0 161 36.6
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 6.6e-17 91.3 161 39.1
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 2.5e-16 89.4 161 39.1
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 2.5e-16 89.4 161 33.5
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 2.5e-16 89.4 161 33.5
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.5e-16 89.4 177 32.8
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 3.3e-16 89.0 161 39.1
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 4.3e-16 88.6 163 36.2
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 4.3e-16 88.6 169 37.9
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 5.6e-16 88.2 162 37.7
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 5.6e-16 88.2 165 35.8
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 9.5e-16 87.4 161 33.5
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.2e-15 87.0 160 35.0
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 1.6e-15 86.7 165 35.2
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 3.6e-15 85.5 161 31.7
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 3.6e-15 85.5 161 31.7
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 3.6e-15 85.5 161 31.7
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 3.6e-15 85.5 161 34.2
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 6.2e-15 84.7 182 34.6
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 6.2e-15 84.7 159 35.8
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 8.1e-15 84.3 171 32.7
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 1.4e-14 83.6 161 33.5
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 1.4e-14 83.6 161 32.3
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 1.8e-14 83.2 162 35.8
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.8e-14 83.2 133 39.1
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 1.8e-14 83.2 162 38.3
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 3.1e-14 82.4 160 35.6
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 2.0e-13 79.7 161 33.5
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 2.6e-13 79.3 162 35.8
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 4.4e-13 78.6 200 31.0
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 7.5e-13 77.8 162 35.2
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 2.2e-12 76.3 187 33.7
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 4.9e-12 75.1 161 33.5
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.1e-11 73.9 163 35.6
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 7.1e-11 71.2 165 31.5
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.2e-10 70.5 163 34.4
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.2e-10 70.5 175 30.9
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 2.1e-10 69.7 170 28.2
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 2.7e-10 69.3 161 29.2
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 5.1e-09 65.1 169 28.4
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.1e-08 63.9 83 44.6
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 5.6e-08 61.6 173 29.5
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 7.3e-08 61.2 115 33.0
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 8.9e-06 54.3 157 29.9


User provided reference genes

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