Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.0e-185 653.3 344 100.0
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.5e-126 456.1 360 73.3
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 3.2e-126 455.7 473 58.1
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 7.0e-57 225.3 493 35.5
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.9e-55 219.5 497 33.6
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 8.1e-53 211.8 477 34.8
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 7.5e-51 205.3 478 34.5
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 7.5e-51 205.3 482 34.4
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 9.8e-51 204.9 482 34.9
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 9.2e-49 198.4 498 32.9
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.6e-48 197.6 486 33.7
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.7e-48 196.8 462 33.3
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 4.6e-48 196.1 512 32.8
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 5.1e-47 192.6 493 30.6
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.1e-46 191.4 493 30.4
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 4.3e-46 189.5 493 30.0
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 2.8e-45 186.8 480 30.8
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 8.1e-45 185.3 483 31.5
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 1.8e-44 184.1 480 30.8
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.3e-44 183.7 441 33.1
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 1.5e-43 181.0 483 29.4
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 2.0e-43 180.6 398 32.9
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 1.3e-42 177.9 309 38.2
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 2.4e-41 173.7 505 30.7
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 7.1e-41 172.2 475 30.3
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 2.1e-40 170.6 502 30.1
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.1e-40 170.6 314 37.9
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 2.7e-40 170.2 467 31.0
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.5e-40 169.9 511 30.1
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 6.0e-40 169.1 484 31.2
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 1.5e-38 164.5 478 29.3
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 4.3e-38 162.9 499 29.5
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 7.3e-38 162.2 482 29.0
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 7.3e-38 162.2 469 30.7
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 1.6e-37 161.0 492 29.3
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 2.1e-37 160.6 477 28.1
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.1e-37 160.6 492 29.3
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 6.2e-37 159.1 437 31.4
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 1.1e-36 158.3 480 29.2
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 3.1e-36 156.8 470 30.2
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 5.2e-36 156.0 481 29.5
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.5e-35 154.5 479 26.9
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.4e-35 153.3 496 28.6
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 5.8e-35 152.5 492 28.7
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.3e-34 151.4 497 28.8
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 1.3e-34 151.4 497 29.2
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.1e-33 148.3 494 29.1
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.1e-33 148.3 497 28.0
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 7.1e-33 145.6 309 32.7
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.2e-32 144.8 317 33.4
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 2.7e-32 143.7 125 56.0
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 3.5e-32 143.3 486 28.4
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 3.0e-31 140.2 494 26.5
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 6.6e-31 139.0 482 28.4
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 6.6e-31 139.0 483 27.5
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 8.7e-31 138.7 306 34.6
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.5e-30 137.9 344 32.6
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 1.9e-30 137.5 482 27.0
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 2.5e-30 137.1 479 26.3
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 3.3e-30 136.7 479 26.5
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 4.3e-30 136.3 484 27.9
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 7.3e-30 135.6 479 26.5
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 7.3e-30 135.6 478 26.8
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 2.1e-29 134.0 482 25.9
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.8e-29 133.7 482 26.3
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 4.8e-29 132.9 479 26.3
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 4.8e-29 132.9 479 26.3
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 4.8e-29 132.9 124 50.0
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 4.8e-29 132.9 477 28.1
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 8.1e-29 132.1 112 56.2
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 8.1e-29 132.1 116 54.3
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 1.4e-28 131.3 483 27.1
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 5.3e-28 129.4 448 29.2
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 6.9e-28 129.0 310 31.3
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 6.9e-28 129.0 477 25.2
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 1.5e-27 127.9 496 25.2
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.6e-27 127.1 483 26.9
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 3.4e-27 126.7 479 26.1
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 5.8e-27 125.9 485 26.4
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 1.1e-25 121.7 483 25.3
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.9e-25 120.9 310 30.6
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.7e-24 117.1 445 27.0
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 4.6e-24 116.3 503 27.0
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 3.0e-23 113.6 129 48.8
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 6.6e-23 112.5 127 48.0
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.1e-22 111.7 124 47.6
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 3.3e-22 110.2 119 46.2
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 8.1e-21 105.5 309 28.5
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.5e-19 101.3 473 25.2
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 7.6e-19 99.0 254 32.3
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 4.2e-17 93.2 100 52.0
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 4.6e-16 89.7 121 38.8
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.3e-15 88.2 426 24.6
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 3.3e-14 83.6 131 32.1
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 7.4e-14 82.4 80 53.8
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 6.2e-13 79.3 289 29.4
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.5e-11 74.7 107 46.7
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.8e-11 72.8 96 46.9
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.4e-09 68.2 101 35.6
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 6.0e-08 62.8 172 32.0
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.0e-07 62.0 95 37.9
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 1.3e-07 61.6 72 40.3
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-07 61.6 72 40.3
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 6.7e-07 59.3 72 38.9
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.5e-06 58.2 55 43.6
Hma1.2p1_0247F.1_g101870 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 2.5e-06 57.4 78 50.0
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 5.7e-06 56.2 88 37.5


User provided reference genes

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