Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.9e-164 582.4 293 100.0
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.4e-153 545.0 295 93.9
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 3.3e-140 501.9 293 88.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 3.8e-136 488.4 293 86.7
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.4e-135 486.5 293 86.0
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 7.4e-132 474.2 293 85.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.7e-131 473.0 293 84.6
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 5.7e-116 421.4 293 74.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 5.9e-113 411.4 244 84.4
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 9.4e-111 404.1 299 71.6
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.6e-110 403.3 243 82.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.1e-110 402.9 299 71.6
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.1e-110 402.9 301 70.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.7e-110 402.5 299 72.2
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 3.6e-110 402.1 278 74.8
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 6.1e-110 401.4 235 83.8
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.0e-109 400.6 243 82.3
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.0e-109 400.6 293 72.7
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.3e-109 399.4 275 75.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.3e-109 399.4 280 72.9
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 3.0e-109 399.1 242 82.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 6.7e-109 397.9 237 82.7
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 8.8e-109 397.5 235 83.0
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 8.8e-109 397.5 294 72.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.0e-108 396.4 268 76.1
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.6e-108 396.0 235 83.4
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 5.7e-108 394.8 294 70.4
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 5.7e-108 394.8 282 74.1
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 7.5e-108 394.4 234 83.8
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.2e-107 392.9 235 82.6
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.8e-107 392.5 232 82.8
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 3.7e-107 392.1 297 71.0
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 4.8e-107 391.7 293 70.0
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 8.3e-107 391.0 234 80.3
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 8.3e-107 391.0 259 76.8
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 8.3e-107 391.0 235 82.6
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.1e-106 390.6 293 71.7
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 7.0e-106 387.9 235 80.9
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 1.6e-105 386.7 300 69.3
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 2.7e-105 386.0 233 82.8
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.7e-105 386.0 232 82.3
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 5.9e-105 384.8 242 78.1
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 7.7e-105 384.4 275 73.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 7.7e-105 384.4 233 81.1
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.3e-104 383.6 294 69.0
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.3e-104 383.6 272 73.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.3e-104 383.6 254 76.0
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 3.8e-104 382.1 272 72.1
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.8e-104 382.1 242 78.9
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 5.0e-104 381.7 232 81.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 5.0e-104 381.7 232 81.0
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 5.0e-104 381.7 237 79.3
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 6.5e-104 381.3 275 70.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 8.5e-104 380.9 242 77.7
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 8.5e-104 380.9 273 69.2
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.5e-103 380.2 234 81.6
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.5e-103 379.4 233 80.3
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.5e-103 379.4 299 68.6
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 3.2e-103 379.0 230 83.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 3.2e-103 379.0 231 81.0
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.2e-103 377.9 232 79.7
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 9.4e-103 377.5 209 87.6
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.2e-102 377.1 237 78.9
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.6e-102 376.7 352 61.6
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.1e-102 376.3 241 78.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 2.7e-102 375.9 292 67.5
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.6e-102 375.6 291 67.4
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.7e-102 375.2 291 67.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.7e-102 375.2 232 80.6
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 6.1e-102 374.8 291 66.7
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 6.1e-102 374.8 278 71.2
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 8.0e-102 374.4 232 81.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.0e-101 374.0 228 81.6
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.3e-101 372.9 296 67.2
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.3e-101 372.9 296 67.2
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 4.0e-101 372.1 296 67.6
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.0e-101 372.1 282 69.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 6.8e-101 371.3 292 66.4
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 8.8e-101 370.9 278 70.1
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 2.6e-100 369.4 232 77.2
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 3.4e-100 369.0 296 67.6
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.5e-100 367.9 288 68.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.4e-98 362.8 285 67.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.1e-98 362.1 284 68.3
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 4.1e-98 362.1 239 76.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 5.4e-98 361.7 314 63.1
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 7.0e-98 361.3 281 69.0
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.2e-97 360.5 291 67.7
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.5e-97 359.0 291 67.4
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.0e-96 357.5 236 75.4
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 5.0e-96 355.1 309 61.5
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 8.6e-96 354.4 265 67.2
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.2e-95 352.1 265 67.2
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 4.2e-95 352.1 241 71.0
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.6e-94 350.1 273 68.1
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.0e-93 347.4 212 81.6
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.9e-87 326.6 304 61.8
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.5e-87 326.2 230 70.4
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.8e-86 322.8 270 61.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.1e-86 321.6 230 76.5
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.0e-80 302.8 220 72.3
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 3.9e-80 302.4 233 67.4
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.4e-74 283.9 250 56.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 4.6e-73 278.9 202 64.9
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 6.6e-72 275.0 202 63.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 5.6e-71 271.9 228 64.0
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.4e-68 262.3 206 68.0
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 7.3e-63 245.0 216 57.4
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.6e-44 183.3 269 43.9
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 9.0e-37 158.3 177 52.5
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-33 147.9 95 78.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 6.0e-33 145.6 178 43.8
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.6e-30 137.5 213 37.6
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 4.8e-30 136.0 94 74.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 3.4e-28 129.8 89 75.3
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.7e-27 127.5 155 40.6
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 2.5e-23 113.6 131 44.3
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.9e-10 70.9 114 38.6
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.7e-09 67.0 47 70.2


User provided reference genes

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