Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 0.0e+00 1385.9 718 100.0
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 0.0e+00 1274.6 720 92.9
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 0.0e+00 1177.9 724 86.9
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 0.0e+00 1172.1 720 84.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 0.0e+00 1169.5 720 86.9
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 0.0e+00 1167.1 724 86.6
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 0.0e+00 1115.1 726 82.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 5.6e-258 894.4 725 67.7
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 2.8e-257 892.1 729 67.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 4.0e-248 861.7 727 65.9
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 4.5e-247 858.2 728 64.8
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.0e-243 845.5 731 63.9
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.1e-242 843.6 724 64.5
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.3e-241 840.1 727 63.8
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 8.2e-241 837.4 738 63.7
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 8.2e-241 837.4 739 64.7
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 3.1e-240 835.5 740 63.5
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 7.6e-239 830.9 739 63.1
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 3.8e-238 828.6 728 62.8
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 5.0e-238 828.2 722 62.7
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 5.5e-237 824.7 724 61.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.2e-236 823.5 735 63.9
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 2.1e-236 822.8 727 62.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.6e-236 822.0 724 62.2
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.6e-236 822.0 734 63.4
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 3.0e-235 818.9 725 62.8
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 5.1e-235 818.1 725 62.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.1e-234 817.0 726 63.8
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.5e-234 816.6 722 62.5
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 3.3e-234 815.5 725 61.0
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 9.7e-234 813.9 728 61.8
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.6e-233 813.1 724 60.5
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.8e-233 811.6 725 61.9
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 8.2e-233 810.8 725 60.7
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.4e-232 810.1 734 62.7
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 2.4e-232 809.3 726 60.7
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 5.3e-232 808.1 725 61.2
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.0e-230 803.9 725 60.3
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.1e-229 800.4 732 60.5
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.4e-229 800.0 734 62.4
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.5e-229 799.3 730 61.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.5e-229 798.1 729 60.2
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 4.6e-228 795.0 726 61.8
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.0e-227 793.9 730 62.2
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 3.0e-227 792.3 741 61.0
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.1e-226 790.4 722 61.5
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.5e-226 790.0 727 62.2
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.3e-226 788.9 726 61.2
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.3e-226 788.9 727 62.0
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.3e-226 788.9 727 62.0
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 4.4e-226 788.5 736 61.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 5.7e-226 788.1 730 62.6
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 5.7e-226 788.1 728 59.5
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 7.4e-226 787.7 726 60.1
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.7e-226 787.3 724 61.5
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 9.7e-226 787.3 724 61.6
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.2e-225 786.2 727 61.9
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 2.8e-225 785.8 726 62.0
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.1e-224 783.9 727 61.8
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.4e-224 782.7 722 61.2
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.4e-223 778.9 727 60.4
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 5.9e-223 778.1 743 60.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.0e-222 777.3 725 61.1
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.3e-222 776.9 735 60.0
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.8e-222 775.4 732 60.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 8.5e-222 774.2 806 55.6
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.2e-220 770.4 756 57.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.8e-219 766.5 733 58.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 8.8e-219 764.2 730 57.5
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.1e-218 763.8 725 59.9
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.8e-217 759.2 713 59.6
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 4.1e-216 755.4 948 49.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 7.7e-215 751.1 724 59.1
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.3e-214 750.4 721 60.2
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 2.2e-214 749.6 648 64.5
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.2e-214 749.6 739 58.6
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 4.2e-213 745.3 727 59.1
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 5.9e-207 724.9 934 49.0
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 2.5e-205 719.5 740 54.3
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 4.2e-205 718.8 738 54.7
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.8e-201 706.1 780 54.2
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 3.1e-200 702.6 738 55.3
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-198 697.2 729 54.6
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 5.5e-197 691.8 730 53.6
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.1e-196 689.9 737 53.2
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 6.1e-196 688.3 724 54.0
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 8.0e-196 688.0 731 53.5
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.8e-195 686.8 734 53.3
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.8e-193 679.5 728 52.6
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.9e-193 678.7 738 54.1
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 9.2e-192 674.5 730 52.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.2e-191 674.1 758 51.6
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 5.9e-191 671.8 758 54.4
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 2.5e-189 666.4 602 61.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 4.0e-187 659.1 739 51.6
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.3e-185 654.1 589 63.0
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.2e-184 649.4 635 57.3
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 9.5e-181 637.9 627 57.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.7e-175 619.8 579 59.4
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 7.3e-173 611.7 607 57.7
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.4e-170 602.8 564 61.2
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.4e-160 570.9 723 49.9
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 4.3e-157 559.3 542 56.8
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 3.1e-155 553.1 604 52.8
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.7e-137 494.2 538 54.8
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 9.3e-128 461.8 805 39.3
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.7e-127 460.3 780 40.3
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.3e-110 404.1 721 35.6
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 7.2e-96 355.9 296 64.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.6e-95 353.6 275 67.6
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 7.5e-85 319.3 471 44.8
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.3e-81 307.8 456 44.7
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.7e-74 284.3 448 41.7
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.2e-63 246.5 321 48.6
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 3.3e-56 224.2 375 41.3
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.1e-55 221.5 181 61.3
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.4e-51 208.8 193 56.0
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 8.1e-47 193.0 153 70.6
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 5.2e-46 190.3 292 41.1
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 4.9e-44 183.7 156 66.7
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 6.6e-41 173.3 156 55.8
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 7.6e-37 159.8 127 75.6
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.4e-35 155.6 133 70.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.6e-31 142.1 100 71.0
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.1e-30 137.9 126 59.5
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 4.9e-28 130.6 107 71.0
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 8.7e-25 119.8 153 47.1
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 1.3e-20 105.9 107 53.3
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 3.9e-09 67.8 141 37.6
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 2.5e-08 65.1 137 33.6


User provided reference genes

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