Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 9.5e-103 376.7 173 100.0
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 6.6e-96 354.0 171 94.7
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 4.1e-90 334.7 163 92.6
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 6.0e-89 330.9 163 92.0
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 6.0e-89 330.9 163 92.0
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 8.6e-88 327.0 161 90.7
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 6.8e-85 317.4 163 89.6
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 1.3e-78 296.6 165 81.8
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.4e-77 293.1 163 81.0
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 4.0e-77 291.6 164 79.3
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 1.5e-76 289.7 163 81.0
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 2.0e-76 289.3 165 78.2
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 2.0e-76 289.3 163 78.5
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 2.0e-76 289.3 163 79.8
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 2.0e-76 289.3 162 78.4
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 2.6e-76 288.9 163 79.1
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 2.6e-76 288.9 167 77.8
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 3.4e-76 288.5 163 78.5
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.4e-76 288.5 163 77.9
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 4.4e-76 288.1 162 80.2
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 4.4e-76 288.1 163 77.3
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 7.6e-76 287.3 163 79.1
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 9.9e-76 287.0 163 78.5
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 1.3e-75 286.6 162 78.4
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.3e-75 286.6 163 76.7
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 1.7e-75 286.2 164 77.4
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 2.2e-75 285.8 163 78.5
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 2.9e-75 285.4 163 77.9
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.9e-75 285.4 172 74.4
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 2.9e-75 285.4 163 79.8
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.8e-75 285.0 164 78.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 6.4e-75 284.3 163 78.5
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 6.4e-75 284.3 162 78.4
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.4e-74 283.1 164 77.4
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 1.4e-74 283.1 163 77.3
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 2.4e-74 282.3 163 76.1
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 9.3e-74 280.4 163 77.3
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.6e-73 279.6 163 75.5
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.7e-73 278.9 163 76.7
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 3.5e-73 278.5 163 77.9
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.5e-73 278.5 164 76.8
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 4.6e-73 278.1 164 76.2
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 1.0e-72 276.9 163 75.5
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.0e-72 276.9 163 76.1
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 1.3e-72 276.6 163 75.5
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 1.3e-72 276.6 185 69.7
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.7e-72 276.2 164 76.2
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.7e-72 276.2 162 74.1
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 3.0e-72 275.4 163 74.8
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 3.9e-72 275.0 163 74.2
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 5.1e-72 274.6 163 75.5
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 6.6e-72 274.2 161 77.0
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.1e-71 273.5 163 74.2
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.5e-71 273.1 164 76.2
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 2.5e-71 272.3 163 76.1
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.3e-71 271.6 162 75.3
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 5.6e-71 271.2 162 75.9
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 7.3e-71 270.8 163 74.2
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 7.3e-71 270.8 154 75.3
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.6e-70 269.6 162 72.2
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 2.1e-70 269.2 163 74.8
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 2.8e-70 268.9 172 72.7
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.8e-70 268.9 162 74.7
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.8e-70 268.9 162 74.7
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 2.8e-70 268.9 164 75.0
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.8e-70 268.1 162 74.1
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 6.2e-70 267.7 164 75.6
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 8.1e-70 267.3 163 75.5
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 8.1e-70 267.3 163 75.5
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.4e-69 266.5 163 73.0
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 4.0e-69 265.0 163 72.4
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 4.0e-69 265.0 163 75.5
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 5.3e-69 264.6 162 69.8
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 6.9e-69 264.2 163 73.6
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.5e-68 263.1 163 73.6
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 4.5e-68 261.5 163 73.0
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 5.8e-68 261.2 164 74.4
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 5.8e-68 261.2 164 74.4
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 5.8e-68 261.2 163 73.6
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 1.7e-67 259.6 163 73.6
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 2.2e-67 259.2 163 74.8
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 4.9e-67 258.1 163 71.8
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 4.9e-67 258.1 163 71.8
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 4.9e-67 258.1 163 71.8
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 8.4e-67 257.3 163 74.8
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 1.4e-66 256.5 163 71.8
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 1.4e-66 256.5 163 71.8
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 1.9e-66 256.1 163 70.6
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 1.9e-66 256.1 163 72.4
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 3.2e-66 255.4 169 69.2
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.4e-66 254.6 164 68.9
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 9.3e-66 253.8 164 70.1
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 7.9e-65 250.8 160 70.0
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 3.9e-64 248.4 139 78.4
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 6.7e-64 247.7 167 67.7
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.1e-63 246.9 167 68.3
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 3.7e-62 241.9 167 66.5
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 4.8e-62 241.5 209 57.4
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.1e-61 240.4 173 65.9
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 7.6e-60 234.2 163 64.4
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 1.0e-59 233.8 215 56.3
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 1.1e-58 230.3 145 73.1
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 1.1e-58 230.3 129 79.8
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 5.5e-58 228.0 245 49.0
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 3.5e-57 225.3 129 78.3
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 6.0e-57 224.6 127 77.2
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 2.3e-56 222.6 129 76.7
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 5.1e-56 221.5 126 77.0
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 1.0e-51 207.2 168 59.5
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 2.2e-51 206.1 166 56.0
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.2e-49 200.3 151 61.6
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.1e-49 199.5 151 60.9
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 4.6e-49 198.4 150 60.7
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 1.0e-48 197.2 108 80.6
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.8e-48 196.4 150 60.7
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 2.5e-47 192.6 105 80.0
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 1.2e-44 183.7 103 76.7
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 1.2e-44 183.7 113 71.7
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.9e-43 179.1 104 75.0
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.1e-42 177.2 116 68.1
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 1.6e-41 173.3 115 67.8
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 3.6e-41 172.2 120 65.8
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 8.2e-38 161.0 97 72.2
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 7.7e-36 154.5 113 63.7
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.0e-35 154.1 89 76.4
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 8.5e-35 151.0 129 51.9
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 3.2e-34 149.1 91 72.5
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.5e-34 148.3 226 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 2.6e-31 139.4 131 49.6
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.8e-29 133.3 85 71.8
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 5.3e-29 131.7 90 64.4
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 1.2e-25 120.6 82 69.5
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 5.7e-23 111.7 103 55.3
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 9.1e-21 104.4 172 36.6
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 6.5e-19 98.2 163 39.3
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 2.0e-12 76.6 44 75.0


User provided reference genes

Program Settings