Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.1e-110 400.2 196 100.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.3e-75 284.3 194 75.8
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.5e-75 283.9 196 76.0
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.0e-74 280.8 196 75.5
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.4e-70 270.0 192 74.5
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.8e-65 253.1 191 70.2
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 4.0e-65 251.9 203 70.0
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 3.7e-63 245.4 191 71.2
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 1.7e-60 236.5 192 70.3
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 2.1e-58 229.6 191 64.9
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.1e-58 227.6 175 71.4
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 9.9e-56 220.7 192 64.6
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.7e-55 219.9 200 65.5
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 1.1e-51 207.2 181 65.7
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.0e-48 196.4 187 60.4
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.3e-46 187.6 185 56.8
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.6e-45 186.8 183 58.5
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.7e-44 183.3 184 56.5
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 5.1e-44 181.8 185 55.7
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 7.3e-43 177.9 191 53.4
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.3e-42 177.2 210 53.3
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.6e-42 176.8 189 55.0
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 4.8e-42 175.3 186 54.3
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 1.1e-41 174.1 187 55.6
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 5.3e-41 171.8 174 55.7
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 5.3e-41 171.8 188 51.6
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.7e-39 166.8 184 49.5
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 2.2e-39 166.4 188 53.7
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 2.2e-39 166.4 190 50.0
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.2e-39 166.4 193 52.8
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 8.4e-39 164.5 192 51.0
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.4e-38 163.7 178 57.3
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.4e-38 162.9 184 51.6
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.4e-38 162.9 187 51.9
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 4.2e-38 162.2 182 49.5
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 4.2e-38 162.2 184 53.3
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 5.4e-38 161.8 191 49.2
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 9.3e-38 161.0 178 57.3
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 9.3e-38 161.0 189 52.9
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.6e-37 160.2 186 50.5
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 2.1e-37 159.8 195 51.3
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 2.7e-37 159.5 182 50.0
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 3.5e-37 159.1 191 49.2
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 7.9e-37 157.9 195 51.3
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 3.9e-36 155.6 183 50.8
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 6.7e-36 154.8 181 50.8
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 1.1e-35 154.1 195 47.7
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.5e-35 153.7 187 48.1
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.5e-35 153.7 185 49.2
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 5.6e-35 151.8 189 52.4
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-35 151.8 183 50.8
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.4e-35 151.4 184 51.6
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.6e-35 151.0 182 51.6
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.3e-34 150.6 196 52.0
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.1e-34 149.8 187 48.1
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.7e-34 149.1 184 49.5
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.7e-34 149.1 187 47.6
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.8e-34 148.7 185 48.6
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.8e-34 148.7 184 48.9
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 1.1e-33 147.5 176 52.3
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.1e-33 147.5 201 48.3
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 4.0e-33 145.6 187 48.1
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 5.3e-33 145.2 182 45.6
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 5.3e-33 145.2 188 44.7
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 6.9e-33 144.8 174 47.7
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.9e-33 144.8 184 47.8
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 6.9e-33 144.8 191 46.6
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.5e-32 143.7 184 45.1
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-32 143.3 185 48.6
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 4.5e-32 142.1 185 44.9
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 4.5e-32 142.1 184 46.7
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 4.5e-32 142.1 194 47.9
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 4.5e-32 142.1 185 46.5
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 4.5e-32 142.1 181 47.5
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 5.8e-32 141.7 184 44.6
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 5.8e-32 141.7 190 44.7
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 7.6e-32 141.4 186 44.1
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 9.9e-32 141.0 181 51.9
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 1.7e-31 140.2 190 46.8
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.2e-31 139.8 185 46.5
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.9e-31 139.4 187 45.5
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 2.9e-31 139.4 197 46.7
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 3.8e-31 139.0 181 46.4
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 4.9e-31 138.7 185 44.3
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.9e-31 138.7 201 45.3
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.9e-31 138.7 201 45.3
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.9e-31 138.7 201 45.3
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 4.9e-31 138.7 190 44.2
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.4e-31 138.3 188 45.7
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 6.4e-31 138.3 196 45.9
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.1e-30 137.5 185 44.9
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.1e-30 137.5 185 44.9
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 1.4e-30 137.1 190 47.4
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.4e-30 137.1 192 45.8
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 1.9e-30 136.7 184 42.9
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.9e-30 136.7 184 43.5
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.9e-30 136.7 184 43.5
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-30 136.7 184 46.2
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 1.9e-30 136.7 185 44.9
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 2.5e-30 136.3 185 43.2
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 2.5e-30 136.3 185 43.2
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 9.3e-30 134.4 189 49.7
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 9.3e-30 134.4 186 47.8
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 9.3e-30 134.4 174 47.7
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.2e-29 134.0 186 42.5
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.2e-29 134.0 202 44.6
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.2e-29 134.0 190 47.4
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.6e-29 133.7 176 44.9
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.1e-29 133.3 189 43.4
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 2.7e-29 132.9 184 42.4
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 2.7e-29 132.9 183 45.4
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 3.5e-29 132.5 181 44.2
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.5e-29 132.5 202 44.6
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 3.5e-29 132.5 187 42.8
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 6.0e-29 131.7 297 33.7
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 6.0e-29 131.7 195 46.7
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 1.0e-28 131.0 193 44.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.8e-28 130.2 185 43.2
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.3e-28 129.8 188 42.0
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 1.9e-27 126.7 177 48.0
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 2.5e-27 126.3 188 45.7
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 2.1e-26 123.2 184 44.6
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 2.8e-26 122.9 187 42.8
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 3.7e-26 122.5 181 43.6
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 8.2e-26 121.3 165 49.1
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.1e-25 120.9 193 38.3
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.4e-25 119.8 184 41.3
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.1e-25 119.4 180 43.9
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.0e-25 119.0 167 47.9
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.0e-25 119.0 190 42.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 9.0e-25 117.9 196 40.8
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.5e-24 117.1 195 37.9
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 2.6e-24 116.3 193 36.8
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 5.8e-24 115.2 194 40.2
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.7e-23 113.6 194 38.1
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 3.8e-23 112.5 196 36.7
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.9e-22 110.2 182 40.7
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 2.5e-22 109.8 196 36.2
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 9.3e-22 107.8 166 41.0
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 2.1e-21 106.7 196 35.7
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 2.1e-21 106.7 196 35.7
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 2.1e-21 106.7 196 35.7
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 2.1e-21 106.7 202 34.7
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.5e-21 105.9 168 42.9
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 7.9e-21 104.8 175 41.1
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-20 102.8 182 40.1
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-19 100.9 157 42.7
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.9e-19 100.1 182 39.6
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 7.4e-19 98.2 155 44.5
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 6.3e-18 95.1 182 39.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 1.8e-17 93.6 211 37.4
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 1.5e-16 90.5 172 39.0
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.6e-16 89.7 137 41.6
CAN.G69.6 Capsicum annuum HOM05D003790 ORTHO05D004481 1.9e-14 83.6 75 64.0
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 4.2e-14 82.4 210 34.8
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 4.2e-14 82.4 117 41.0
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 5.5e-14 82.0 173 37.6
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.2e-14 81.6 138 36.2
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.2e-14 81.6 143 39.9
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 9.4e-14 81.3 174 36.8
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 8.8e-12 74.7 212 32.1
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.5e-11 73.9 192 28.1
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.5e-11 73.2 149 35.6
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 5.7e-11 72.0 186 32.8
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 7.4e-11 71.6 89 48.3
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-10 70.5 134 37.3
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.2e-10 70.1 78 48.7
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.8e-10 69.7 134 38.1
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.8e-10 69.7 198 34.3
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.8e-10 68.9 158 34.8
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 1.1e-09 67.8 181 27.6
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 1.4e-09 67.4 173 34.1
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-09 67.0 95 44.2
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.1e-09 66.2 107 37.4
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 1.5e-08 63.9 180 28.3
SEGI_22892 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.0e-07 61.2 189 32.3
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 1.3e-07 60.8 200 30.0
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.7e-07 60.5 198 29.3
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.9e-06 57.0 173 32.4
TAR629G3365 Trochodendron aralioides HOM05D001131 ORTHO05D000972 2.5e-06 56.6 195 28.7
Sed0010143 Sechium edule HOM05D001131 ORTHO05D000972 7.2e-06 55.1 212 26.4
SEGI_11031 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 7.2e-06 55.1 191 29.3


User provided reference genes

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