Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-197 692.2 343 100.0
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.8e-60 237.3 150 82.0
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-53 214.5 252 53.6
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.0e-48 195.7 152 71.7
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.7e-45 186.0 131 75.6
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.2e-45 185.7 149 69.1
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 7.5e-43 178.7 308 41.9
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-41 174.1 194 54.1
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-39 167.9 133 70.7
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.9e-39 166.4 135 68.9
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.3e-34 148.7 124 64.5
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-33 146.4 108 72.2
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.0e-32 142.5 333 32.1
Nitab4.5_0000894g0060 Nicotiana tabacum HOM05D007931 ORTHO05D000126 6.2e-29 132.5 71 93.0
Nitab4.5_0004048g0070 Nicotiana tabacum HOM05D007931 ORTHO05D000126 8.1e-29 132.1 113 65.5
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-26 122.9 133 57.1
Nitab4.5_0004512g0040 Nicotiana tabacum HOM05D007931 ORTHO05D014660 3.2e-25 120.2 108 63.9
Nitab4.5_0000043g0230 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.9e-22 110.9 78 74.4
Nitab4.5_0002837g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.9e-20 102.4 62 80.6
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.9e-18 97.1 120 40.8
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.4e-18 95.9 73 71.2
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.4e-17 94.7 98 45.9
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.2e-17 93.2 88 55.7
Nitab4.5_0012359g0040 Nicotiana tabacum HOM05D007931 ORTHO05D000126 2.1e-16 90.9 69 72.5
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-15 88.6 73 67.1
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.1e-15 86.3 98 42.9
Nitab4.5_0003727g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.6e-15 85.9 70 64.3
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-13 81.6 152 34.2
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-13 79.7 105 42.9
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.2e-13 79.3 43 86.0
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.2e-13 79.3 67 67.2
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 8.1e-13 79.0 80 47.5
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-12 78.6 73 60.3
Nitab4.5_0003032g0060 Nicotiana tabacum HOM05D007931 ORTHO05D014660 5.3e-12 76.3 54 66.7
Nitab4.5_0011919g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 9.0e-12 75.5 44 79.5
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 9.0e-12 75.5 85 48.2
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.4e-11 73.6 66 57.6
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.8e-11 72.8 167 34.1
Nitab4.5_0001383g0080 Nicotiana tabacum HOM05D007931 ORTHO05D000126 9.9e-11 72.0 57 54.4
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-10 71.6 82 43.9
Nitab4.5_0000780g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.4e-10 69.3 77 49.4
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 8.4e-10 68.9 51 51.0
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.9e-09 67.8 68 55.9
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 3.2e-09 67.0 70 54.3
Nitab4.5_0000016g0560 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.3e-09 65.5 39 76.9
Nitab4.5_0001243g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.6e-08 64.7 59 52.5
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-08 64.3 72 50.0
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.5e-08 63.5 82 43.9
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.6e-08 63.2 43 74.4
Nitab4.5_0005181g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 6.0e-08 62.8 33 78.8
Nitab4.5_0000894g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 7.9e-08 62.4 63 46.0
Nitab4.5_0003032g0070 Nicotiana tabacum HOM05D007931 ORTHO05D286551 7.9e-08 62.4 41 75.6
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 7.9e-08 62.4 40 75.0
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.0e-07 60.5 141 32.6
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 3.9e-07 60.1 40 70.0
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.7e-07 59.3 78 42.3
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-06 58.5 90 35.6
Sopen02g012250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 57.4 40 67.5
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.3e-06 57.0 94 33.0


User provided reference genes

Program Settings