Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010523g0040 Nicotiana tabacum HOM05D003535 ORTHO05D003986 2.9e-75 285.4 177 100.0
Nitab4.5_0000257g0080 Nicotiana tabacum HOM05D003535 ORTHO05D003986 1.7e-62 243.0 134 94.8
Sopen05g002290 Solanum pennellii HOM05D003535 ORTHO05D003986 5.1e-59 231.5 131 90.8
PGSC0003DMG400015612 Solanum tuberosum HOM05D003535 ORTHO05D003986 4.3e-58 228.4 131 89.3
Solyc05g006320.4 Solanum lycopersicum HOM05D003535 ORTHO05D003986 6.2e-57 224.6 131 87.8
CAN.G159.17 Capsicum annuum HOM05D003535 ORTHO05D003986 3.1e-48 195.7 131 78.6
Peaxi162Scf01141g00123 Petunia axillaris HOM05D003535 ORTHO05D003986 8.9e-48 194.1 135 74.8
Dinv31119 Davidia involucrata HOM05D003535 ORTHO05D003986 4.6e-28 128.6 126 54.8
FAN12G2559 Fragaria x ananassa HOM05D003535 ORTHO05D003986 1.6e-25 120.2 131 50.4
MD16G1085300 Malus domestica HOM05D003535 ORTHO05D003986 2.1e-25 119.8 130 53.1
FAN17G0780 Fragaria x ananassa HOM05D003535 ORTHO05D003986 2.8e-25 119.4 131 50.4
Atru.chr11.1948 Acer truncatum HOM05D003535 ORTHO05D003986 3.7e-25 119.0 131 49.6
FAN22G0047 Fragaria x ananassa HOM05D003535 ORTHO05D003986 3.7e-25 119.0 131 50.4
vmacro16290 Vaccinium macrocarpon HOM05D003535 ORTHO05D003986 4.8e-25 118.6 130 47.7
Prupe.1G260800 Prunus persica HOM05D003535 ORTHO05D003986 8.1e-25 117.9 125 52.8
FvH4_4g35140 Fragaria vesca HOM05D003535 ORTHO05D003986 3.1e-24 115.9 123 52.0
DCAR_007109 Daucus carota HOM05D003535 ORTHO05D003986 9.0e-24 114.4 126 49.2
Hma1.2p1_1049F.1_g251850 Hydrangea macrophylla HOM05D003535 ORTHO05D003986 9.0e-24 114.4 127 48.0
Rhsim12G0125300 Rhododendron simsii HOM05D003535 ORTHO05D003986 2.0e-23 113.2 130 46.2
Thecc.02G240800 Theobroma cacao HOM05D003535 ORTHO05D003986 2.6e-23 112.8 129 50.4
Ciclev10032090m.g Citrus clementina HOM05D003535 ORTHO05D003986 4.5e-23 112.1 131 48.1
Manes.01G195800 Manihot esculenta HOM05D003535 ORTHO05D003986 7.6e-23 111.3 129 46.5
FAN07G1389 Fragaria x ananassa HOM05D003535 ORTHO05D003986 1.0e-22 110.9 131 47.3
Manes.05G092900 Manihot esculenta HOM05D003535 ORTHO05D003986 2.2e-22 109.8 132 48.5
Dinv24911 Davidia involucrata HOM05D003535 ORTHO05D003986 4.9e-22 108.6 112 53.6
Duzib248G0495 Durio zibethinus HOM05D003535 ORTHO05D003986 6.5e-22 108.2 131 47.3
Cfa009095 Carpinus fangiana HOM05D003535 ORTHO05D003986 1.1e-21 107.5 130 46.2
CSS0008340 Camellia sinensis var. sinensis HOM05D003535 ORTHO05D003986 1.4e-21 107.1 127 44.1
CSS0014348 Camellia sinensis var. sinensis HOM05D003535 ORTHO05D003986 1.4e-21 107.1 127 44.1
Cc11_g14150 Coffea canephora HOM05D003535 ORTHO05D003986 1.4e-21 107.1 131 46.6
Potri.008G193300 Populus trichocarpa HOM05D003535 ORTHO05D003986 1.4e-21 107.1 138 48.6
Actinidia15000 Actinidia chinensis HOM05D003535 ORTHO05D003986 1.9e-21 106.7 128 43.8
MD13G1085900 Malus domestica HOM05D003535 ORTHO05D003986 1.9e-21 106.7 117 50.4
Gohir.D12G147100 Gossypium hirsutum HOM05D003535 ORTHO05D003986 4.2e-21 105.5 134 47.8
Gorai.008G158300 Gossypium raimondii HOM05D003535 ORTHO05D003986 4.2e-21 105.5 134 47.8
Haze_12127 Corylus avellana HOM05D003535 ORTHO05D003986 7.1e-21 104.8 130 48.5
Duzib251G0917 Durio zibethinus HOM05D003535 ORTHO05D003986 7.1e-21 104.8 131 45.8
Gohir.A12G142200 Gossypium hirsutum HOM05D003535 ORTHO05D003986 2.1e-20 103.2 130 47.7
Oeu018841.2 Olea europaea HOM05D003535 ORTHO05D003986 3.5e-20 102.4 117 48.7
ECA233G0946 Erigeron canadensis HOM05D003535 ORTHO05D003986 6.0e-20 101.7 121 45.5
Duzib251G0037 Durio zibethinus HOM05D003535 ORTHO05D003986 1.0e-19 100.9 131 45.0
Gohir.D04G138200 Gossypium hirsutum HOM05D003535 ORTHO05D003986 1.3e-19 100.5 127 47.2
SalBow2G1585 Salvia bowleyana HOM05D003535 ORTHO05D003986 2.3e-19 99.8 120 44.2
VMungo1215G1093 Vigna mungo HOM05D003535 ORTHO05D003986 2.3e-19 99.8 133 45.9
Gohir.A04G098600 Gossypium hirsutum HOM05D003535 ORTHO05D003986 3.0e-19 99.4 127 47.2
Gorai.012G123100 Gossypium raimondii HOM05D003535 ORTHO05D003986 3.9e-19 99.0 127 47.2
Actinidia08185 Actinidia chinensis HOM05D003535 ORTHO05D003986 5.1e-19 98.6 127 44.1
Glyma.02G029300 Glycine max HOM05D003535 ORTHO05D003986 8.7e-19 97.8 133 45.1
Hma1.2p1_0160F.1_g070560 Hydrangea macrophylla HOM05D003535 ORTHO05D003986 8.7e-19 97.8 133 48.1
TWI18G1263 Tripterygium wilfordii HOM05D003535 ORTHO05D003986 1.5e-18 97.1 107 52.3
Potri.010G036500 Populus trichocarpa HOM05D003535 ORTHO05D003986 1.9e-18 96.7 90 57.8
MSTRG.630 Avicennia marina HOM05D003535 ORTHO05D003986 2.5e-18 96.3 120 47.5
Actinidia04050 Actinidia chinensis HOM05D003535 ORTHO05D003986 3.3e-18 95.9 88 51.1
Phvul.002G076000 Phaseolus vulgaris HOM05D003535 ORTHO05D003986 4.3e-18 95.5 134 43.3
Glyma.01G036700 Glycine max HOM05D003535 ORTHO05D003986 7.4e-18 94.7 127 45.7
Lj2g0022595 Lotus japonicus HOM05D003535 ORTHO05D003986 7.4e-18 94.7 133 42.9
RcHm_v2.0_Chr4g0444731 Rosa chinensis HOM05D003535 ORTHO05D003986 9.6e-18 94.4 136 44.1
Lalb_Chr16g0382501 Lupinus albus HOM05D003535 ORTHO05D003986 1.3e-17 94.0 132 43.2
CsaV3_5G025420 Cucumis sativus L. HOM05D003535 ORTHO05D003986 2.1e-17 93.2 124 42.7
arahy.Tifrunner.gnm1.ann1.FE2K59 Arachis hypogaea HOM05D003535 ORTHO05D003986 6.2e-17 91.7 132 43.9
arahy.Tifrunner.gnm1.ann1.Y99B41 Arachis hypogaea HOM05D003535 ORTHO05D003986 6.2e-17 91.7 132 43.9
MSTRG.7864 Avicennia marina HOM05D003535 ORTHO05D003986 6.2e-17 91.7 119 42.0
MELO3C002939.2 Cucumis melo HOM05D003535 ORTHO05D003986 6.2e-17 91.7 124 41.9
vmacro01199 Vaccinium macrocarpon HOM05D003535 ORTHO05D003986 1.4e-16 90.5 130 40.0
Actinidia27767 Actinidia chinensis HOM05D003535 ORTHO05D003986 2.4e-16 89.7 127 40.9
Psat2g113240 Pisum sativum HOM05D003535 ORTHO05D003986 2.4e-16 89.7 131 46.6
ClCG09G022140 Citrullus lanatus HOM05D003535 ORTHO05D003986 4.1e-16 89.0 127 40.2
Rhsim12G0050600 Rhododendron simsii HOM05D003535 ORTHO05D003986 6.9e-16 88.2 128 40.6
TWI36G0475 Tripterygium wilfordii HOM05D003535 ORTHO05D003986 1.2e-15 87.4 110 46.4
Sc11g0001410 Simmondsia chinensis HOM05D003535 ORTHO05D003986 3.4e-15 85.9 126 44.4
CiPaw.05G145800 Carya illinoinensis HOM05D003535 ORTHO05D003986 4.5e-15 85.5 106 46.2
Migut.L01454 Erythranthe guttata HOM05D003535 ORTHO05D003986 1.7e-14 83.6 119 46.2
Nn3g17007 Nelumbo nucifera HOM05D003535 ORTHO05D003986 1.7e-14 83.6 122 44.3
TAR629G0129 Trochodendron aralioides HOM05D003535 ORTHO05D003986 1.7e-14 83.6 122 41.0
Ca_18085_v3 Cicer arietinum L. HOM05D003535 ORTHO05D003986 2.2e-14 83.2 132 37.9
TPR.G13941 Trifolium pratense HOM05D003535 ORTHO05D003986 2.2e-14 83.2 132 39.4
GSVIVG01020154001 Vitis vinifera HOM05D003535 ORTHO05D003986 2.9e-14 82.8 121 35.5
CiPaw.06G075600 Carya illinoinensis HOM05D003535 ORTHO05D003986 5.0e-14 82.0 129 41.1
Sabra08G0146800 Salix brachista HOM05D003535 ORTHO05D003986 1.1e-13 80.9 137 40.1
Sed0012956 Sechium edule HOM05D003535 ORTHO05D003986 1.1e-13 80.9 124 38.7
Eucgr.B02565 Eucalyptus grandis HOM05D003535 ORTHO05D003986 1.4e-13 80.5 126 42.9
MBI14_g12776_MAGBIO Magnolia biondii HOM05D003535 ORTHO05D003986 1.9e-13 80.1 130 41.5
Medtr5g035810 Medicago truncatula HOM05D003535 ORTHO05D003986 1.9e-13 80.1 117 41.9
QL03p067125 Quercus lobata HOM05D003535 ORTHO05D003986 1.9e-13 80.1 133 41.4
COL.COLO4_37887 Corchorus olitorius HOM05D003535 ORTHO05D003986 2.5e-13 79.7 129 38.8
AUR62026558 Chenopodium quinoa HOM05D003535 ORTHO05D003986 2.7e-12 76.3 126 46.0
AUR62039423 Chenopodium quinoa HOM05D003535 ORTHO05D003986 2.7e-12 76.3 128 44.5
Nn4g22912 Nelumbo nucifera HOM05D003535 ORTHO05D003986 7.9e-12 74.7 126 36.5
Sabra10G0028600 Salix brachista HOM05D003535 ORTHO05D003986 3.9e-11 72.4 89 48.3
SGA_v2.0_scaffold166G38327 Striga asiatica HOM05D003535 ORTHO05D003986 5.1e-11 72.0 120 36.7
EL10Ac6g13752 Beta vulgaris HOM05D003535 ORTHO05D003986 1.5e-10 70.5 127 41.7
Aqoxy3G00881 Aquilegia oxysepala HOM05D003535 ORTHO05D003986 3.3e-10 69.3 122 40.2
TAR622G1103 Trochodendron aralioides HOM05D003535 ORTHO05D003986 9.7e-10 67.8 120 40.0
Dinv33673 Davidia involucrata HOM05D003535 ORTHO05D003986 1.6e-09 67.0 124 37.9
arahy.Tifrunner.gnm1.ann1.95J0BI Arachis hypogaea HOM05D003535 ORTHO05D003986 2.2e-09 66.6 125 38.4
Hund05943 Selenicereus undatus HOM05D003535 ORTHO05D003986 6.3e-09 65.1 129 38.8
Hund25313 Selenicereus undatus HOM05D003535 ORTHO05D003986 6.3e-09 65.1 126 38.1
arahy.Tifrunner.gnm1.ann1.KT3LL4 Arachis hypogaea HOM05D003535 ORTHO05D003986 1.4e-08 63.9 125 37.6
PSO161G0011 Papaver somniferum HOM05D003535 ORTHO05D003986 2.4e-08 63.2 129 38.0
Lsat_1_v5_gn_8_162680 Lactuca sativa HOM05D003535 ORTHO05D003986 3.1e-08 62.8 132 39.4
PGR119G2209 Punica granatum HOM05D003535 ORTHO05D003986 3.1e-08 62.8 118 36.4
THA.LOC104824671 Tarenaya hassleriana HOM05D003535 ORTHO05D003986 2.6e-07 59.7 163 27.6
GSVIVG01007821001 Vitis vinifera HOM05D003535 ORTHO05D003986 2.6e-07 59.7 94 40.4
Sc11g0001420 Simmondsia chinensis HOM05D003535 ORTHO05D003986 3.4e-07 59.3 122 35.2
PSO478G4390 Papaver somniferum HOM05D003535 ORTHO05D003986 1.3e-06 57.4 122 37.7


User provided reference genes

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