Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010503g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.2e-54 216.1 98 100.0
Nitab4.5_0001256g0060 Nicotiana tabacum HOM05D000430 ORTHO05D000305 2.0e-28 129.0 71 77.5
Nitab4.5_0006651g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.7e-27 125.9 74 78.4
Nitab4.5_0009868g0030 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.1e-26 123.2 71 74.6
Nitab4.5_0007526g0030 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.5e-25 119.4 69 73.9
Nitab4.5_0001256g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 2.0e-25 119.0 71 70.4
Nitab4.5_0001256g0050 Nicotiana tabacum HOM05D000430 ORTHO05D000305 5.9e-25 117.5 65 76.9
Nitab4.5_0000635g0190 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.3e-24 116.3 71 70.4
Nitab4.5_0008553g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.3e-24 116.3 65 76.9
PGSC0003DMG400026632 Solanum tuberosum HOM05D000430 ORTHO05D000305 1.0e-21 106.7 67 65.7
Nitab4.5_0012401g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.4e-21 106.3 67 73.1
Sopen10g004460 Solanum pennellii HOM05D000430 ORTHO05D000305 1.4e-21 106.3 67 64.2
Nitab4.5_0002657g0020 Nicotiana tabacum HOM05D000430 ORTHO05D000305 2.0e-20 102.4 63 73.0
Peaxi162Scf00269g00122 Petunia axillaris HOM05D000430 ORTHO05D000305 2.0e-20 102.4 67 65.7
PGSC0003DMG400006485 Solanum tuberosum HOM05D000430 ORTHO05D000305 4.8e-19 97.8 75 60.0
Peaxi162Scf00530g00051 Petunia axillaris HOM05D000430 ORTHO05D000305 1.8e-18 95.9 70 64.3
Peaxi162Scf00269g00135 Petunia axillaris HOM05D000430 ORTHO05D000305 3.1e-18 95.1 70 61.4
Sopen10g004470 Solanum pennellii HOM05D000430 ORTHO05D000305 2.6e-17 92.0 67 59.7
PGSC0003DMG400007692 Solanum tuberosum HOM05D000430 ORTHO05D000305 6.5e-16 87.4 71 50.7
Oeu005772.1 Olea europaea HOM05D000430 ORTHO05D000305 7.2e-15 84.0 71 52.1
Nitab4.5_0003195g0050 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.6e-14 82.8 56 67.9
Peaxi162Scf00086g00011 Petunia axillaris HOM05D000430 ORTHO05D000305 2.1e-14 82.4 89 50.6
Solyc10g008680.3 Solanum lycopersicum HOM05D000430 ORTHO05D000305 8.0e-14 80.5 61 54.1
PGSC0003DMG400038389 Solanum tuberosum HOM05D000430 ORTHO05D000305 8.0e-14 80.5 61 55.7
MSTRG.6527 Avicennia marina HOM05D000430 ORTHO05D000305 4.0e-13 78.2 63 46.0
Oeu061578.1 Olea europaea HOM05D000430 ORTHO05D000305 8.8e-13 77.0 63 47.6
Migut.M00341 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.2e-12 76.6 65 43.1
Oeu042237.1 Olea europaea HOM05D000430 ORTHO05D000305 1.2e-12 76.6 65 44.6
Oeu042238.1 Olea europaea HOM05D000430 ORTHO05D000305 1.2e-12 76.6 65 44.6
MSTRG.14174 Avicennia marina HOM05D000430 ORTHO05D000305 9.8e-12 73.6 65 41.5
GSVIVG01000468001 Vitis vinifera HOM05D000430 ORTHO05D000305 9.8e-12 73.6 69 40.6
Dinv15238 Davidia involucrata HOM05D000430 ORTHO05D000305 2.2e-11 72.4 70 48.6
Dinv24790 Davidia involucrata HOM05D000430 ORTHO05D000305 2.8e-11 72.0 82 41.5
SalBow7G3329 Salvia bowleyana HOM05D000430 ORTHO05D000305 3.7e-11 71.6 65 40.0
PGSC0003DMG400026629 Solanum tuberosum HOM05D000430 ORTHO05D000305 3.7e-11 71.6 64 54.7
SGA_v2.0_scaffold159G37616 Striga asiatica HOM05D000430 ORTHO05D000305 8.3e-11 70.5 65 49.2
Migut.M00354 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.4e-10 69.7 64 50.0
Oeu061577.1 Olea europaea HOM05D000430 ORTHO05D000305 1.8e-10 69.3 63 41.3
Oeu046213.1 Olea europaea HOM05D000430 ORTHO05D000305 3.1e-10 68.6 61 44.3
SalBow5G0848 Salvia bowleyana HOM05D000430 ORTHO05D000305 3.1e-10 68.6 71 47.9
GSVIVG01000472001 Vitis vinifera HOM05D000430 ORTHO05D000305 3.1e-10 68.6 66 39.4
MSTRG.17988 Avicennia marina HOM05D000430 ORTHO05D000305 4.1e-10 68.2 69 44.9
SalBow7G2258 Salvia bowleyana HOM05D000430 ORTHO05D000305 5.4e-10 67.8 64 46.9
Migut.B01649 Erythranthe guttata HOM05D000430 ORTHO05D000305 7.0e-10 67.4 67 47.8
Dinv31597 Davidia involucrata HOM05D000430 ORTHO05D000305 9.1e-10 67.0 65 44.6
MSTRG.6528 Avicennia marina HOM05D000430 ORTHO05D000305 1.6e-09 66.2 69 43.5
Migut.H01012 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.6e-09 66.2 65 41.5
MSTRG.17204 Avicennia marina HOM05D000430 ORTHO05D000305 2.7e-09 65.5 71 43.7
SalBow1G2030 Salvia bowleyana HOM05D000430 ORTHO05D000305 2.7e-09 65.5 67 38.8
Migut.M00343 Erythranthe guttata HOM05D000430 ORTHO05D000305 4.5e-09 64.7 76 42.1
MSTRG.12296 Avicennia marina HOM05D000430 ORTHO05D000305 5.9e-09 64.3 65 40.0
SGA_v2.0_scaffold49G18314 Striga asiatica HOM05D000430 ORTHO05D000305 5.9e-09 64.3 66 42.4
SalBow5G5275 Salvia bowleyana HOM05D000430 ORTHO05D000305 7.7e-09 63.9 83 36.1
SalBow7G2909 Salvia bowleyana HOM05D000430 ORTHO05D000305 7.7e-09 63.9 69 40.6
MSTRG.12318 Avicennia marina HOM05D000430 ORTHO05D000305 2.2e-08 62.4 65 40.0
MSTRG.20762 Avicennia marina HOM05D000430 ORTHO05D000305 2.2e-08 62.4 73 39.7
Dinv15237 Davidia involucrata HOM05D000430 ORTHO05D000305 2.9e-08 62.0 70 42.9
Oeu033085.1 Olea europaea HOM05D000430 ORTHO05D000305 2.9e-08 62.0 65 36.9
TAR633G0297 Trochodendron aralioides HOM05D000430 ORTHO05D000305 2.9e-08 62.0 68 48.5
GSVIVG01000461001 Vitis vinifera HOM05D000430 ORTHO05D000305 2.9e-08 62.0 67 37.3
Migut.M00345 Erythranthe guttata HOM05D000430 ORTHO05D000305 3.8e-08 61.6 74 41.9
SalBow7G4366 Salvia bowleyana HOM05D000430 ORTHO05D000305 5.0e-08 61.2 69 43.5
Nn1g06016 Nelumbo nucifera HOM05D000430 ORTHO05D000305 1.1e-07 60.1 69 40.6
Oeu033082.1 Olea europaea HOM05D000430 ORTHO05D000305 1.1e-07 60.1 65 36.9
Migut.M00344 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.5e-07 59.7 65 43.1
Lj1g0009402 Lotus japonicus HOM05D000430 ORTHO05D000305 1.5e-07 59.7 73 43.8
SGA_v2.0_scaffold153G37033 Striga asiatica HOM05D000430 ORTHO05D000305 1.5e-07 59.7 68 38.2
CANSAT01G2300 Cannabis sativa HOM05D000430 ORTHO05D000305 1.9e-07 59.3 57 47.4
Migut.M00342 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.9e-07 59.3 70 41.4
SalBow7G1578 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.9e-07 59.3 65 41.5
CiPaw.04G055100 Carya illinoinensis HOM05D000430 ORTHO05D000305 2.5e-07 58.9 82 41.5
Hma1.2p1_0044F.1_g026370 Hydrangea macrophylla HOM05D000430 ORTHO05D000305 3.2e-07 58.5 63 41.3
QL02p059009 Quercus lobata HOM05D000430 ORTHO05D000305 3.2e-07 58.5 53 54.7
TAR365G1017 Trochodendron aralioides HOM05D000430 ORTHO05D000305 3.2e-07 58.5 53 50.9
unitig_26.g9934 Utricularia gibba HOM05D002278 ORTHO05D008576 3.2e-07 58.5 61 42.6
QL02p058919 Quercus lobata HOM05D000430 ORTHO05D000305 4.2e-07 58.2 53 52.8
QL10p014150 Quercus lobata HOM05D000430 ORTHO05D000305 4.2e-07 58.2 53 52.8
Dinv15503 Davidia involucrata HOM05D000430 ORTHO05D000305 5.5e-07 57.8 70 40.0
Thecc.04G096800 Theobroma cacao HOM05D000430 ORTHO05D000305 5.5e-07 57.8 56 51.8
unitig_578.g16408 Utricularia gibba HOM05D000430 ORTHO05D000305 5.5e-07 57.8 69 37.7
RcHm_v2.0_Chr1g0334691 Rosa chinensis HOM05D000430 ORTHO05D000305 7.2e-07 57.4 65 41.5
CiPaw.02G048300 Carya illinoinensis HOM05D000430 ORTHO05D000305 9.4e-07 57.0 53 50.9
CiPaw.04G055000 Carya illinoinensis HOM05D000430 ORTHO05D000305 9.4e-07 57.0 53 50.9
Haze_14422 Corylus avellana HOM05D000430 ORTHO05D000305 9.4e-07 57.0 53 50.9
CANSAT01G0997 Cannabis sativa HOM05D000430 ORTHO05D000305 1.2e-06 56.6 57 45.6
Duzib147G0042 Durio zibethinus HOM05D000430 ORTHO05D000305 1.2e-06 56.6 56 48.2
TAR365G0136 Trochodendron aralioides HOM05D000430 ORTHO05D000305 1.2e-06 56.6 53 49.1
Migut.B01650 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.6e-06 56.2 73 38.4
Glyma.18G268400 Glycine max HOM05D000430 ORTHO05D000305 1.6e-06 56.2 65 41.5
Cfa021262 Carpinus fangiana HOM05D000430 ORTHO05D000305 2.1e-06 55.8 54 53.7
TPR.G33455 Trifolium pratense HOM05D000430 ORTHO05D000305 2.1e-06 55.8 79 35.4
CANSAT64G2912 Cannabis sativa HOM05D000430 ORTHO05D000305 2.7e-06 55.5 55 50.9
Nn4g24894 Nelumbo nucifera HOM05D000430 ORTHO05D000305 2.7e-06 55.5 52 46.2
Nn5g28357 Nelumbo nucifera HOM05D000430 ORTHO05D000305 2.7e-06 55.5 53 47.2
Sabra16G0307900 Salix brachista HOM05D000430 ORTHO05D000305 2.7e-06 55.5 66 40.9
TAR365G1243 Trochodendron aralioides HOM05D000430 ORTHO05D000305 2.7e-06 55.5 53 49.1
Cpa.g.sc383.1 Carica papaya HOM05D000430 ORTHO05D000305 3.6e-06 55.1 61 41.0
COL.COLO4_35426 Corchorus olitorius HOM05D000430 ORTHO05D000305 3.6e-06 55.1 57 47.4
FAN09G2191 Fragaria x ananassa HOM05D000430 ORTHO05D000305 3.6e-06 55.1 54 46.3
FAN14G0928 Fragaria x ananassa HOM05D000430 ORTHO05D000305 3.6e-06 55.1 54 46.3
COL.COLO4_37963 Corchorus olitorius HOM05D000430 ORTHO05D000305 4.7e-06 54.7 54 48.1
Haze_14440 Corylus avellana HOM05D000430 ORTHO05D000305 4.7e-06 54.7 54 50.0
FAN05G5263 Fragaria x ananassa HOM05D000430 ORTHO05D000305 4.7e-06 54.7 54 46.3
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 4.7e-06 54.7 68 41.2
Nn5g28805 Nelumbo nucifera HOM05D000430 ORTHO05D000305 6.1e-06 54.3 58 44.8
Glyma.18G268300 Glycine max HOM05D000430 ORTHO05D000305 8.0e-06 53.9 69 44.9
Gorai.011G138500 Gossypium raimondii HOM05D000430 ORTHO05D000305 8.0e-06 53.9 53 43.4


User provided reference genes

Program Settings