Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 7.6e-245 850.1 420 100.0
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 4.6e-234 814.3 420 95.7
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 3.4e-221 771.5 420 88.3
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 1.2e-213 746.5 420 86.4
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 7.6e-213 743.8 426 86.2
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.4e-185 653.3 375 85.9
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 8.8e-185 650.6 424 74.8
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.2e-167 592.8 420 68.3
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 4.1e-166 588.6 383 72.8
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 6.6e-164 581.3 423 67.4
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 1.0e-161 573.9 408 73.8
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.7e-154 548.5 428 66.1
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 4.4e-152 542.0 462 59.7
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 2.2e-151 539.7 424 63.9
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 2.2e-151 539.7 379 68.1
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.9e-150 536.6 422 63.0
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 2.7e-149 532.7 418 61.5
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 4.6e-149 531.9 418 60.5
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 6.0e-149 531.6 427 61.8
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 6.0e-149 531.6 454 59.0
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.0e-148 530.8 422 61.8
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.0e-148 529.3 418 60.0
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 6.6e-148 528.1 418 60.3
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.5e-147 526.2 422 61.6
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 5.6e-147 525.0 418 59.8
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 9.5e-147 524.2 427 61.6
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.6e-146 523.5 382 65.4
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.1e-146 523.1 383 65.8
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.1e-145 520.8 395 64.3
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 2.3e-145 519.6 423 61.5
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 4.0e-145 518.8 419 58.9
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.9e-143 511.9 427 61.4
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.1e-142 510.8 418 59.6
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.2e-142 509.2 420 58.8
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 2.7e-141 506.1 423 58.9
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 3.9e-140 502.3 385 63.6
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 6.6e-140 501.5 423 57.9
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 6.6e-140 501.5 429 58.7
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.1e-139 500.7 421 58.9
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.5e-139 500.4 420 59.3
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 1.9e-139 500.0 422 59.5
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.5e-139 499.6 423 57.9
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 2.5e-139 499.6 424 60.4
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 3.3e-139 499.2 432 58.3
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 3.3e-139 499.2 425 59.3
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 1.2e-138 497.3 372 64.2
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 4.7e-138 495.4 424 58.7
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 1.1e-137 494.2 381 64.0
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 2.4e-137 493.0 420 58.3
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.8e-137 491.5 420 58.3
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.5e-136 490.3 420 57.9
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.0e-136 490.0 422 57.3
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 3.4e-136 489.2 420 56.9
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 7.6e-136 488.0 427 56.7
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 7.6e-136 488.0 424 56.8
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.7e-135 486.9 419 60.1
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.4e-134 483.8 423 57.0
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 2.4e-134 483.0 423 57.0
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 3.2e-134 482.6 377 61.0
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 4.2e-134 482.3 423 59.3
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 7.1e-134 481.5 423 56.7
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 9.2e-134 481.1 427 57.8
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 2.1e-133 479.9 423 57.2
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 2.7e-133 479.6 430 56.5
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.7e-132 476.9 423 56.7
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 3.0e-132 476.1 427 56.7
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.5e-131 473.0 424 55.9
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 9.6e-131 471.1 432 56.7
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 1.2e-130 470.7 419 55.1
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 2.4e-129 466.5 503 48.7
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 3.1e-129 466.1 422 56.9
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.5e-128 463.8 380 58.9
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 2.0e-128 463.4 423 54.8
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 2.0e-128 463.4 432 56.0
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 6.4e-127 458.4 484 50.8
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 9.3e-126 454.5 424 55.7
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 9.3e-126 454.5 424 55.7
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-125 454.1 379 57.5
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 1.0e-124 451.1 424 54.7
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.0e-124 451.1 424 55.2
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 2.3e-124 449.9 424 55.0
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 3.9e-124 449.1 424 55.0
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 3.9e-124 449.1 422 52.8
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.3e-122 444.1 445 53.0
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.0e-120 436.8 435 51.7
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.6e-120 436.4 430 52.3
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 5.8e-120 435.3 435 53.8
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 5.4e-118 428.7 424 52.8
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.6e-117 427.2 411 49.6
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 4.6e-117 425.6 400 55.0
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 2.3e-116 423.3 381 54.9
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 3.0e-108 396.4 399 51.9
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 1.1e-107 394.4 353 55.5
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.1e-105 387.9 424 48.8
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 4.0e-105 386.0 424 48.6
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 9.0e-105 384.8 435 47.6
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 1.5e-104 384.0 387 52.5
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 2.0e-104 383.6 437 46.5
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.0e-103 381.3 429 46.6
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 2.2e-103 380.2 430 47.2
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 3.8e-103 379.4 421 46.3
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 4.9e-103 379.0 324 56.2
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 7.1e-102 375.2 435 46.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.5e-99 367.5 409 50.6
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 6.5e-95 352.1 412 47.3
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 4.3e-91 339.3 424 43.9
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.7e-90 337.4 428 40.9
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 4.1e-89 332.8 420 42.6
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 2.0e-88 330.5 319 56.1
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 5.9e-88 328.9 417 42.9
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 7.7e-88 328.6 399 44.9
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.0e-87 328.2 433 42.5
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.7e-87 327.4 445 40.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 5.0e-87 325.9 433 42.5
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 2.5e-86 323.6 440 41.4
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 2.0e-83 313.9 282 54.3
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.0e-83 313.9 439 39.9
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 7.2e-78 295.4 443 41.8
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 5.2e-76 289.3 416 38.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 3.3e-75 286.6 267 53.6
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 2.2e-74 283.9 351 43.9
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.2e-68 262.7 392 37.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 5.5e-54 216.1 286 44.1
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 4.0e-52 209.9 412 31.1
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.1e-28 130.6 130 46.2
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.4e-25 121.7 151 47.0
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.5e-14 84.3 76 55.3
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 6.6e-07 59.7 42 73.8
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 8.7e-07 59.3 41 73.2
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 8.7e-07 59.3 42 73.8
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 1.5e-06 58.5 45 68.9
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 1.9e-06 58.2 43 67.4


User provided reference genes

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