Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.2e-76 288.9 143 100.0
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 5.5e-48 194.5 114 86.0
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 4.9e-36 154.8 116 69.8
CAN.G338.33 Capsicum annuum HOM05D012681 ORTHO05D010506 1.9e-32 142.9 111 67.6
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 5.4e-27 124.8 111 61.3
PGSC0003DMG400018124 Solanum tuberosum HOM05D012681 ORTHO05D010506 5.4e-27 124.8 108 61.1
Solyc03g112210.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 7.0e-27 124.4 108 60.2
Sopen03g031310 Solanum pennellii HOM05D012681 ORTHO05D010506 7.0e-27 124.4 108 60.2
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.9e-24 116.3 107 52.3
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.5e-24 115.9 115 55.7
PGSC0003DMG400018123 Solanum tuberosum HOM05D012681 ORTHO05D010506 4.7e-23 111.7 110 56.4
Solyc03g112220.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 3.1e-22 109.0 110 56.4
Sopen03g031320 Solanum pennellii HOM05D012681 ORTHO05D010506 3.1e-22 109.0 110 56.4
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 3.6e-15 85.5 103 43.7
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.3e-14 82.8 103 42.7
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 9.9e-13 77.4 116 40.5
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 1.7e-12 76.6 107 38.3
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.1e-11 73.9 105 40.0
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 2.4e-11 72.8 116 33.6
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 1.2e-10 70.5 118 38.1
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 4.6e-10 68.6 116 38.8
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 7.8e-10 67.8 111 36.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.0e-09 67.4 113 36.3
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 6.6e-09 64.7 111 35.1
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 1.5e-08 63.5 110 38.2
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 1.5e-08 63.5 102 37.3
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 7.3e-08 61.2 106 32.1
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 9.5e-08 60.8 101 36.6
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.6e-07 60.1 118 34.7
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 1.6e-07 60.1 115 33.9
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 2.8e-07 59.3 111 32.4
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.1e-06 57.4 106 34.9
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 1.8e-06 56.6 110 35.5
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.8e-06 56.6 110 31.8
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 4.0e-06 55.5 103 36.9
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 6.8e-06 54.7 121 27.3
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 6.8e-06 54.7 102 34.3
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 8.9e-06 54.3 101 38.6
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 8.9e-06 54.3 118 33.1


User provided reference genes

Program Settings