Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010449g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.8e-37 156.4 75 100.0
Nitab4.5_0000909g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.2e-31 137.9 75 89.3
Nitab4.5_0013233g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.4e-31 136.3 70 92.9
Nitab4.5_0004422g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.3e-29 131.7 72 87.5
Nitab4.5_0013078g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.3e-29 131.7 67 92.5
Nitab4.5_0002975g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.1e-29 130.6 67 92.5
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-28 129.0 70 84.3
Nitab4.5_0000497g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.4e-28 127.5 67 91.0
Nitab4.5_0020633g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.4e-28 126.7 67 89.6
Nitab4.5_0003435g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-27 125.9 70 85.7
Nitab4.5_0000212g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-27 125.6 67 85.1
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.7e-27 124.4 70 85.7
Nitab4.5_0000632g0070 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.8e-27 124.0 67 89.6
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.2e-27 123.2 67 86.6
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-26 122.9 67 88.1
Nitab4.5_0009232g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-26 122.9 67 86.6
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.1e-26 120.9 69 84.1
Nitab4.5_0012454g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.1e-26 120.9 83 74.7
Nitab4.5_0003330g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-25 119.0 70 81.4
Nitab4.5_0002444g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.0e-25 118.6 70 80.0
Nitab4.5_0006365g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.0e-24 116.3 73 79.5
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.9e-24 114.8 67 76.1
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.5e-24 113.2 67 77.6
Nitab4.5_0014003g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-23 112.5 67 74.6
Nitab4.5_0007509g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.5e-23 110.5 61 86.9
Nitab4.5_0007703g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-22 109.4 61 85.2
Nitab4.5_0011677g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-22 108.6 60 86.7
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 3.9e-21 104.4 67 68.7
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 8.8e-21 103.2 67 67.2
Nitab4.5_0000659g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-20 102.4 60 80.0
Nitab4.5_0004881g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-20 102.4 72 66.7
Nitab4.5_0003517g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.3e-20 101.3 54 83.3
Nitab4.5_0003780g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.4e-20 100.1 63 81.0
CAN.G453.5 Capsicum annuum HOM05D002441 ORTHO05D008317 3.7e-19 97.8 67 67.2
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.3e-19 97.1 72 63.9
Nitab4.5_0004430g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.2e-19 96.7 60 75.0
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.9e-17 90.5 67 58.2
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.7e-17 90.1 67 58.2
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-16 89.4 67 61.2
Nitab4.5_0008207g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.2e-16 88.6 67 62.7
Nitab4.5_0008086g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.5e-16 87.0 67 56.7
Nitab4.5_0000999g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.9e-15 85.5 70 50.0
Nitab4.5_0008011g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.2e-15 84.3 67 53.7
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.4e-15 83.2 70 54.3
Nitab4.5_0004405g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.0e-14 80.1 68 52.9
Nitab4.5_0005752g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.8e-13 77.0 61 55.7
Nitab4.5_0006882g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.8e-13 77.0 75 54.7
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.8e-11 70.9 56 57.1
arahy.Tifrunner.gnm1.ann1.19G1TH Arachis hypogaea HOM05D002441 ORTHO05D008317 1.1e-10 69.7 68 45.6
Nitab4.5_0004363g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-10 69.7 35 88.6
Nitab4.5_0013898g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-10 69.3 53 60.4
arahy.Tifrunner.gnm1.ann1.GB31PP Arachis hypogaea HOM05D002441 ORTHO05D008317 1.8e-10 68.9 65 44.6
arahy.Tifrunner.gnm1.ann1.RLQ2A3 Arachis hypogaea HOM05D002441 ORTHO05D008317 1.8e-10 68.9 68 45.6
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-10 68.9 33 97.0
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.4e-10 68.6 69 44.9
Nitab4.5_0001851g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.1e-10 68.2 35 91.4
Nitab4.5_0007210g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.1e-10 68.2 54 55.6
Nitab4.5_0007230g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.1e-10 67.8 52 57.7
Nitab4.5_0001503g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.0e-10 67.0 35 85.7
arahy.Tifrunner.gnm1.ann1.AJ0GPW Arachis hypogaea HOM05D002441 ORTHO05D008317 1.6e-09 65.9 68 42.6
Nitab4.5_0000109g0580 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-09 65.9 67 47.8
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 2.7e-09 65.1 69 42.0
arahy.Tifrunner.gnm1.ann1.TD74G4 Arachis hypogaea HOM05D002441 ORTHO05D008317 2.7e-09 65.1 69 42.0
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 3.5e-09 64.7 67 40.3
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.5e-09 64.7 67 40.3
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 3.5e-09 64.7 67 40.3
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 3.5e-09 64.7 67 40.3
Nitab4.5_0006452g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.5e-09 64.7 67 52.2
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 7.7e-09 63.5 69 40.6
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 7.7e-09 63.5 67 38.8
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 1.0e-08 63.2 61 52.5
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-08 62.8 68 38.2
arahy.Tifrunner.gnm1.ann1.NFD50Z Arachis hypogaea HOM05D000353 ORTHO05D000174 2.2e-08 62.0 68 36.8
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-08 62.0 64 39.1
Nitab4.5_0000044g0460 Nicotiana tabacum HOM05D011943 ORTHO05D008317 2.9e-08 61.6 50 54.0
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.9e-08 61.6 68 41.2
arahy.Tifrunner.gnm1.ann1.PEM48P Arachis hypogaea HOM05D002441 ORTHO05D008317 3.8e-08 61.2 69 42.0
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 3.8e-08 61.2 64 35.9
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 5.0e-08 60.8 67 40.3
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 6.5e-08 60.5 69 40.6
arahy.Tifrunner.gnm1.ann1.1348G9 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.5e-08 60.1 58 41.4
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 8.5e-08 60.1 68 36.8
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 59.7 68 36.8
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 59.7 68 36.8
arahy.Tifrunner.gnm1.ann1.MEW2SM Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 59.7 52 48.1
Nitab4.5_0000305g0130 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-07 59.3 67 50.7
arahy.Tifrunner.gnm1.ann1.1X530R Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-07 58.5 66 37.9
arahy.Tifrunner.gnm1.ann1.HMM5RD Arachis hypogaea HOM05D000353 ORTHO05D000174 2.5e-07 58.5 69 34.8
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 3.2e-07 58.2 67 38.8
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 3.2e-07 58.2 67 40.3
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 4.2e-07 57.8 69 36.2
Medtr5g070620 Medicago truncatula HOM05D000353 ORTHO05D008317 4.2e-07 57.8 62 45.2
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 5.5e-07 57.4 65 43.1
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 7.2e-07 57.0 68 36.8
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 7.2e-07 57.0 68 36.8
Medtr8g467450 Medicago truncatula HOM05D000353 ORTHO05D008317 7.2e-07 57.0 64 35.9
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.BHW5G9 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 35.3
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.XQZ42W Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 35.3
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 9.4e-07 56.6 68 42.6
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.4e-07 56.6 33 72.7
TPR.G9150 Trifolium pratense HOM05D007499 ORTHO05D000174 9.4e-07 56.6 64 43.8
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-06 56.2 68 41.2
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 1.2e-06 56.2 63 38.1
Nitab4.5_0005043g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-06 56.2 31 80.6
Nitab4.5_0006081g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-06 56.2 46 52.2
Peaxi162Scf00496g00410 Petunia axillaris HOM05D002441 ORTHO05D008317 1.6e-06 55.8 38 65.8
TPR.G14684 Trifolium pratense HOM05D007499 ORTHO05D000174 1.6e-06 55.8 64 42.2
arahy.Tifrunner.gnm1.ann1.3QWG3L Arachis hypogaea HOM05D000353 ORTHO05D000174 2.1e-06 55.5 67 34.3
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 2.1e-06 55.5 35 65.7
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.7e-06 55.1 68 30.9
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.7e-06 55.1 68 30.9
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 2.7e-06 55.1 67 29.9
TPR.G37330 Trifolium pratense HOM05D008036 ORTHO05D008317 2.7e-06 55.1 68 36.8
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 65 41.5
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 65 41.5
arahy.Tifrunner.gnm1.ann1.II26ZH Arachis hypogaea HOM05D002441 ORTHO05D008317 3.6e-06 54.7 68 32.4
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 65 41.5
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 65 41.5
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 65 41.5
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 4.7e-06 54.3 35 65.7
Peaxi162Scf00060g00311 Petunia axillaris HOM05D002441 ORTHO05D002376 4.7e-06 54.3 35 65.7
Peaxi162Scf00108g00810 Petunia axillaris HOM05D011943 ORTHO05D008317 4.7e-06 54.3 57 47.4
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 6.1e-06 53.9 68 30.9
arahy.Tifrunner.gnm1.ann1.BHF996 Arachis hypogaea HOM05D000353 ORTHO05D000174 6.1e-06 53.9 67 38.8
arahy.Tifrunner.gnm1.ann1.HC104Q Arachis hypogaea HOM05D002441 ORTHO05D002376 6.1e-06 53.9 69 39.1
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-06 53.5 68 41.2
ECA236G2289 Erigeron canadensis HOM05D000353 ORTHO05D008317 8.0e-06 53.5 67 40.3
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 8.0e-06 53.5 65 41.5
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 8.0e-06 53.5 68 33.8
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 8.0e-06 53.5 68 33.8


User provided reference genes

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